Detail information of GWHGAAEX006075/evm.TU.scaffold_177.44_evm.TU.scaffold_177.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225453606|ref|XP_002265121.1|1.55E-38PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]
Swissprottr|Q8L4D8|IQD31_ARATH1.00E-13Protein IQ-DOMAIN 31
trEMBLtr|M0UAQ3|M0UAQ3_MUSAM5.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP19940_001}
TAIRAT4G106401.00E-33IQ-domain 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000185862889866595-
Transcript Sequence

Network for GWHGAAEX006075

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00612.26IQ1181375.50E-05
PF00612.26IQ1401580.093
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.340
SRR2545915Juvenile tuber4.570
SRP108465SRR5643513five period of Gastrodia elata2.000
SRR5643514five period of Gastrodia elata2.300
SRR5643515five period of Gastrodia elata1.860
SRR5643524five period of Gastrodia elata1.840
SRR5643525five period of Gastrodia elata3.920
SRR5643528five period of Gastrodia elata1.530
SRR5643658five period of Gastrodia elata2.420
SRR5643659five period of Gastrodia elata5.430
SRR5643660five period of Gastrodia elata7.410
SRR5643661five period of Gastrodia elata9.750
SRR5643662five period of Gastrodia elata9.420
SRR5643663five period of Gastrodia elata8.170
SRR5643664five period of Gastrodia elata15.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.810
SRR6049655Rhizomagastrodiae_C368-T10_good_12.140
SRR6049656Rhizomagastrodiae_C368-T07_good_12.120
SRR6049657Rhizomagastrodiae_C368-T07_good_12.250
SRR6049658Rhizomagastrodiae_C368-T04_good_11.720
SRR6049659Rhizomagastrodiae_C368-T04_good_11.010
SRR6049660Rhizomagastrodiae_C368-T01_good_12.410
SRR6049661Rhizomagastrodiae_C368-T04_good_13.300
SRR6049662Rhizomagastrodiae_C368-T01_good_14.030
SRR6049663Rhizomagastrodiae_C368-T01_good_11.290
SRR6049664Rhizomagastrodiae_C368-T10_good_12.580
SRR6049665Rhizomagastrodiae_C368-T10_good_12.580
SRP279888GastroGastrodia elata tuber 11.10
JuvenJuvenile tuber4.89
Mother_GastroMother tuber of Gastrodia elata 3.53
Mother_JuvenMother tuber of Juvenile 3.17