Detail information of GWHGAAEX006078/evm.TU.scaffold_177.48
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440680806|ref|YP_007155601.1| | 2.00E-101 | Kef-type potassium/proton antiporter, CPA2 family [Anabaena cylindrica PCC 7122] |
| KOG | KOG1650 | 0 | Predicted K+/H+-antiporter |
| nr | gi|695014250|ref|XP_009393937.1| | 0 | PREDICTED: K(+) efflux antiporter 5 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8VYR9|KEA5_ARATH | 0 | K(+) efflux antiporter 5 |
| trEMBL | tr|M0SFM9|M0SFM9_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P18130_001} |
| TAIR | AT5G51710 | 0 | K+ efflux antiporter 5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000185 | 903813 | 968743 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006078
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00999.20 | Na_H_Exchanger | 173 | 542 | 2.50E-72 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006812 | Biological Process | cation transport |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0015299 | Molecular Function | solute:proton antiporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.890 |
| SRR2545915 | Juvenile tuber | 12.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.040 |
| SRR5643514 | five period of Gastrodia elata | 6.180 | |
| SRR5643515 | five period of Gastrodia elata | 5.900 | |
| SRR5643524 | five period of Gastrodia elata | 6.080 | |
| SRR5643525 | five period of Gastrodia elata | 7.200 | |
| SRR5643528 | five period of Gastrodia elata | 6.740 | |
| SRR5643658 | five period of Gastrodia elata | 7.600 | |
| SRR5643659 | five period of Gastrodia elata | 5.120 | |
| SRR5643660 | five period of Gastrodia elata | 4.790 | |
| SRR5643661 | five period of Gastrodia elata | 5.770 | |
| SRR5643662 | five period of Gastrodia elata | 4.750 | |
| SRR5643663 | five period of Gastrodia elata | 4.700 | |
| SRR5643664 | five period of Gastrodia elata | 3.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.540 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.210 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.670 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.130 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.350 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.210 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.460 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.860 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.860 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.90 |
| Juven | Juvenile tuber | 4.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.75 | |
| Mother_Juven | Mother tuber of Juvenile | 7.22 |