Detail information of GWHGAAEX006082/evm.TU.scaffold_177.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743828704|ref|XP_010933934.1|1.53E-156PREDICTED: barley B recombinant-like protein D [Elaeis guineensis]
Swissprottr|Q5VSA8|BBRD_ORYSJ3.00E-123Barley B recombinant-like protein D
trEMBLtr|B2Z458|B2Z458_VITVI1.00E-141GAGA-binding transcriptional activator BBR/BPC6-like {ECO:0000313|EMBL:ACC64529.1}
TAIRAT5G425202.00E-106basic pentacysteine 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001859994701040092-
Transcript Sequence

Network for GWHGAAEX006082

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06217.11GAGA_bind73646.60E-95
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBBR-BPC

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.920
SRR2545915Juvenile tuber16.520
SRP108465SRR5643513five period of Gastrodia elata25.230
SRR5643514five period of Gastrodia elata21.700
SRR5643515five period of Gastrodia elata24.500
SRR5643524five period of Gastrodia elata25.150
SRR5643525five period of Gastrodia elata31.570
SRR5643528five period of Gastrodia elata26.380
SRR5643658five period of Gastrodia elata25.590
SRR5643659five period of Gastrodia elata21.940
SRR5643660five period of Gastrodia elata22.040
SRR5643661five period of Gastrodia elata26.840
SRR5643662five period of Gastrodia elata23.370
SRR5643663five period of Gastrodia elata20.440
SRR5643664five period of Gastrodia elata22.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.580
SRR6049655Rhizomagastrodiae_C368-T10_good_118.700
SRR6049656Rhizomagastrodiae_C368-T07_good_121.800
SRR6049657Rhizomagastrodiae_C368-T07_good_125.060
SRR6049658Rhizomagastrodiae_C368-T04_good_125.350
SRR6049659Rhizomagastrodiae_C368-T04_good_126.940
SRR6049660Rhizomagastrodiae_C368-T01_good_123.070
SRR6049661Rhizomagastrodiae_C368-T04_good_119.970
SRR6049662Rhizomagastrodiae_C368-T01_good_120.840
SRR6049663Rhizomagastrodiae_C368-T01_good_124.570
SRR6049664Rhizomagastrodiae_C368-T10_good_121.190
SRR6049665Rhizomagastrodiae_C368-T10_good_121.190
SRP279888GastroGastrodia elata tuber 20.05
JuvenJuvenile tuber26.39
Mother_GastroMother tuber of Gastrodia elata 28.91
Mother_JuvenMother tuber of Juvenile 20.46