Detail information of GWHGAAEX006094/evm.TU.scaffold_177.66
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|384207554|ref|YP_005593274.1| | 3.00E-08 | hypothetical protein Bint_0058 [Brachyspira intermedia PWS/A] |
| KOG | KOG1308 | 4.00E-101 | Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein |
| nr | gi|695022604|ref|XP_009398437.1| | 0 | PREDICTED: FAM10 family protein At4g22670-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q93YR3|F10AL_ARATH | 5.00E-123 | FAM10 family protein At4g22670 |
| trEMBL | tr|M0SR13|M0SR13_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P22000_001} |
| TAIR | AT4G22670_2 | 4.00E-101 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000185 | 1333783 | 1358297 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006094
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046983 | Molecular Function | protein dimerization activity |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 174.070 |
| SRR2545915 | Juvenile tuber | 281.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 284.950 |
| SRR5643514 | five period of Gastrodia elata | 252.870 | |
| SRR5643515 | five period of Gastrodia elata | 254.780 | |
| SRR5643524 | five period of Gastrodia elata | 232.300 | |
| SRR5643525 | five period of Gastrodia elata | 206.580 | |
| SRR5643528 | five period of Gastrodia elata | 251.870 | |
| SRR5643658 | five period of Gastrodia elata | 165.420 | |
| SRR5643659 | five period of Gastrodia elata | 295.830 | |
| SRR5643660 | five period of Gastrodia elata | 290.940 | |
| SRR5643661 | five period of Gastrodia elata | 270.600 | |
| SRR5643662 | five period of Gastrodia elata | 173.440 | |
| SRR5643663 | five period of Gastrodia elata | 217.700 | |
| SRR5643664 | five period of Gastrodia elata | 215.250 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 357.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 291.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 346.500 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 323.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 277.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 247.610 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 249.430 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 330.360 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 355.490 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 301.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 340.630 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 340.630 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 287.91 |
| Juven | Juvenile tuber | 474.15 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 119.32 | |
| Mother_Juven | Mother tuber of Juvenile | 303.96 |