Detail information of GWHGAAEX006095/evm.TU.scaffold_177.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694996326|ref|XP_009393423.1|0PREDICTED: probable transcriptional regulator SLK2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q94BP0|SLK2_ARATH1.00E-132Probable transcriptional regulator SLK2
trEMBLtr|M0RY01|M0RY01_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P07930_001}
TAIRAT5G620904.00E-132SEUSS-like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018513600091377154+
Transcript Sequence

Network for GWHGAAEX006095

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01803.15LIM_bind2114713.80E-59
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.070
SRR2545915Juvenile tuber26.230
SRP108465SRR5643513five period of Gastrodia elata25.440
SRR5643514five period of Gastrodia elata27.670
SRR5643515five period of Gastrodia elata26.450
SRR5643524five period of Gastrodia elata27.780
SRR5643525five period of Gastrodia elata33.560
SRR5643528five period of Gastrodia elata37.170
SRR5643658five period of Gastrodia elata40.470
SRR5643659five period of Gastrodia elata27.410
SRR5643660five period of Gastrodia elata29.130
SRR5643661five period of Gastrodia elata26.170
SRR5643662five period of Gastrodia elata31.570
SRR5643663five period of Gastrodia elata29.710
SRR5643664five period of Gastrodia elata30.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.780
SRR6049655Rhizomagastrodiae_C368-T10_good_124.040
SRR6049656Rhizomagastrodiae_C368-T07_good_123.630
SRR6049657Rhizomagastrodiae_C368-T07_good_121.630
SRR6049658Rhizomagastrodiae_C368-T04_good_123.070
SRR6049659Rhizomagastrodiae_C368-T04_good_123.690
SRR6049660Rhizomagastrodiae_C368-T01_good_127.490
SRR6049661Rhizomagastrodiae_C368-T04_good_121.920
SRR6049662Rhizomagastrodiae_C368-T01_good_129.960
SRR6049663Rhizomagastrodiae_C368-T01_good_129.040
SRR6049664Rhizomagastrodiae_C368-T10_good_130.970
SRR6049665Rhizomagastrodiae_C368-T10_good_130.970
SRP279888GastroGastrodia elata tuber 39.93
JuvenJuvenile tuber38.84
Mother_GastroMother tuber of Gastrodia elata 38.48
Mother_JuvenMother tuber of Juvenile 34.92