Detail information of GWHGAAEX006100/evm.TU.scaffold_177.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16080937|ref|NP_391765.1|3.00E-145UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. 168]
KOGKOG13710UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
nrgi|743854337|ref|XP_010940867.1|0PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like [Elaeis guineensis]
Swissprottr|B0M3E8|UGE1_PEA0Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1
trEMBLtr|M0S132|M0S132_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P18740_001}
TAIRAT1G127800UDP-D-glucose/UDP-D-galactose 4-epimerase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018514205791424529-
Transcript Sequence

Network for GWHGAAEX006100

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.4GDP_Man_Dehyd113361.20E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01784galE, GALE Metabolic pathways map01100
Galactose metabolismmap00052
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0006012Biological Processgalactose metabolic process
GO:0003978Molecular FunctionUDP-glucose 4-epimerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.560
SRR2545915Juvenile tuber16.150
SRP108465SRR5643513five period of Gastrodia elata10.620
SRR5643514five period of Gastrodia elata10.670
SRR5643515five period of Gastrodia elata21.530
SRR5643524five period of Gastrodia elata15.540
SRR5643525five period of Gastrodia elata276.370
SRR5643528five period of Gastrodia elata338.890
SRR5643658five period of Gastrodia elata476.120
SRR5643659five period of Gastrodia elata2.370
SRR5643660five period of Gastrodia elata7.700
SRR5643661five period of Gastrodia elata1.750
SRR5643662five period of Gastrodia elata9.150
SRR5643663five period of Gastrodia elata2.580
SRR5643664five period of Gastrodia elata20.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.540
SRR6049655Rhizomagastrodiae_C368-T10_good_17.390
SRR6049656Rhizomagastrodiae_C368-T07_good_113.500
SRR6049657Rhizomagastrodiae_C368-T07_good_126.100
SRR6049658Rhizomagastrodiae_C368-T04_good_168.480
SRR6049659Rhizomagastrodiae_C368-T04_good_185.390
SRR6049660Rhizomagastrodiae_C368-T01_good_121.690
SRR6049661Rhizomagastrodiae_C368-T04_good_148.560
SRR6049662Rhizomagastrodiae_C368-T01_good_17.490
SRR6049663Rhizomagastrodiae_C368-T01_good_116.550
SRR6049664Rhizomagastrodiae_C368-T10_good_112.950
SRR6049665Rhizomagastrodiae_C368-T10_good_112.950
SRP279888GastroGastrodia elata tuber 28.33
JuvenJuvenile tuber0.41
Mother_GastroMother tuber of Gastrodia elata 106.57
Mother_JuvenMother tuber of Juvenile 16.10