Detail information of GWHGAAEX006101/evm.TU.scaffold_177.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|408403982|ref|YP_006861965.1|3.00E-49glucose/ribitol dehydrogenase family protein [Candidatus Nitrososphaera gargensis Ga9.2]
KOGKOG12084.00E-155Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
nrgi|743777679|ref|XP_010919277.1|7.23E-164PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Elaeis guineensis]
Swissprottr|A2RVM0|TIC32_ARATH2.00E-85Short-chain dehydrogenase TIC 32, chloroplastic
trEMBLtr|A0A022R3X5|A0A022R3X5_ERYGU5.00E-158Uncharacterized protein {ECO:0000313|EMBL:EYU33505.1}
TAIRAT4G240504.00E-155NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018514268551428358-
Transcript Sequence

Network for GWHGAAEX006101

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short341748.80E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11153RDH12 Metabolic pathways map01100
Retinol metabolismmap00830

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.260
SRR2545915Juvenile tuber0.390
SRP108465SRR5643513five period of Gastrodia elata0.280
SRR5643514five period of Gastrodia elata0.140
SRR5643515five period of Gastrodia elata0.260
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata9.880
SRR5643528five period of Gastrodia elata5.970
SRR5643658five period of Gastrodia elata13.150
SRR5643659five period of Gastrodia elata0.300
SRR5643660five period of Gastrodia elata0.330
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata1.150
SRR5643663five period of Gastrodia elata1.380
SRR5643664five period of Gastrodia elata4.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.410
SRR6049655Rhizomagastrodiae_C368-T10_good_10.280
SRR6049656Rhizomagastrodiae_C368-T07_good_10.550
SRR6049657Rhizomagastrodiae_C368-T07_good_11.000
SRR6049658Rhizomagastrodiae_C368-T04_good_11.510
SRR6049659Rhizomagastrodiae_C368-T04_good_10.560
SRR6049660Rhizomagastrodiae_C368-T01_good_10.970
SRR6049661Rhizomagastrodiae_C368-T04_good_12.310
SRR6049662Rhizomagastrodiae_C368-T01_good_11.220
SRR6049663Rhizomagastrodiae_C368-T01_good_10.690
SRR6049664Rhizomagastrodiae_C368-T10_good_10.540
SRR6049665Rhizomagastrodiae_C368-T10_good_10.540
SRP279888GastroGastrodia elata tuber 1.45
JuvenJuvenile tuber0.44
Mother_GastroMother tuber of Gastrodia elata 1.17
Mother_JuvenMother tuber of Juvenile 0.08