Detail information of GWHGAAEX006102/evm.TU.scaffold_177.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00485.00E-64Transcription factor, Myb superfamily
nrgi|693302222|gb|AIS35930.1|1.69E-97MYB transcription factor 13 [Phalaenopsis equestris]
Swissprottr|Q38850|MYB5_ARATH1.00E-64Transcription repressor MYB5
trEMBLtr|A0A096ZX78|A0A096ZX78_PHAEQ6.00E-98MYB transcription factor 13 {ECO:0000313|EMBL:AIS35930.1}
TAIRAT3G135405.00E-64myb domain protein 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018514695961471086-
Transcript Sequence

Network for GWHGAAEX006102

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14612.90E-14
PF00249.30Myb_DNA-binding671125.20E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.220
SRR2545915Juvenile tuber17.800
SRP108465SRR5643513five period of Gastrodia elata28.120
SRR5643514five period of Gastrodia elata9.560
SRR5643515five period of Gastrodia elata74.610
SRR5643524five period of Gastrodia elata17.560
SRR5643525five period of Gastrodia elata102.840
SRR5643528five period of Gastrodia elata378.350
SRR5643658five period of Gastrodia elata58.130
SRR5643659five period of Gastrodia elata87.630
SRR5643660five period of Gastrodia elata5.830
SRR5643661five period of Gastrodia elata20.200
SRR5643662five period of Gastrodia elata52.700
SRR5643663five period of Gastrodia elata23.730
SRR5643664five period of Gastrodia elata37.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.000
SRR6049655Rhizomagastrodiae_C368-T10_good_137.890
SRR6049656Rhizomagastrodiae_C368-T07_good_131.100
SRR6049657Rhizomagastrodiae_C368-T07_good_150.600
SRR6049658Rhizomagastrodiae_C368-T04_good_161.150
SRR6049659Rhizomagastrodiae_C368-T04_good_1103.860
SRR6049660Rhizomagastrodiae_C368-T01_good_1110.110
SRR6049661Rhizomagastrodiae_C368-T04_good_153.500
SRR6049662Rhizomagastrodiae_C368-T01_good_143.230
SRR6049663Rhizomagastrodiae_C368-T01_good_189.890
SRR6049664Rhizomagastrodiae_C368-T10_good_134.980
SRR6049665Rhizomagastrodiae_C368-T10_good_134.980
SRP279888GastroGastrodia elata tuber 16.89
JuvenJuvenile tuber0.75
Mother_GastroMother tuber of Gastrodia elata 386.04
Mother_JuvenMother tuber of Juvenile 97.51