Gene detail

Detail information of GWHGAAEX006105/evm.TU.scaffold_177.82

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|120435883\|ref\|YP_861569.1\|	2.00E-08	hypothetical protein GFO_1528 [Gramella forsetii KT0803]
KOG	KOG4711	3.00E-131	Predicted membrane protein
nr	gi\|743777712\|ref\|XP_010919295.1\|	8.89E-168	PREDICTED: LOW QUALITY PROTEIN: aluminum-activated malate transporter 10-like [Elaeis guineensis]
Swissprot	tr\|O23086\|ALMTA_ARATH	7.00E-135	Aluminum-activated malate transporter 10
trEMBL	tr\|I1P319\|I1P319_ORYGL	7.00E-156	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA02G0237500.1}
TAIR	AT4G00910	3.00E-131	Aluminium activated malate transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000185	1749107	1751666	+

Transcript Sequence
>GWHTAAEX006105 CTTTATTGAAGGAAACTTTTTTGAATTCCACATTAACAACATTACTCTTTAATTAATGCAACTCGTGCTTAGTCCAACTTGAGGAAACTATAAACTCAGATTTCTTTCATATAATTGAGATCAAAGTGACTCCATAAAATTTGAGTGGCATGGTTTAATTTTTTCTTAAAAGCTAATTATCACTACTACTGCTTCTTATATATAAGGCAGCCCACCCCTCCTGTCTTCGTATATACAAGGCTAGAACAGATGGCCGCATGCAATAATAGTAAGGAGATATCAATGGCCGCATCGGCATCGCCGGCAGAATGGAAGATTGTTGTAGCGGAGACGACGGAGGCGGAGACGGAGAAGAAACACGGGCCGGCCCGACGGGTTTCGGCCATCGGGTCGACGGCGTGGAAGCTGGCCAAGGATGACCCGAGAAGGGTGGTTCATGGGGTCAAGGTCGGGCTCTCGCTCGCCGCGGTCTCCTTCGTCTACTACCTGAGGCCGCTCTACGACGGCTTCGGAAGCTCGGCGTTGTGGGCCGTGATGACAGTCGTCGTCGTGTTTGAGTACTCTGTGGGCGGGAGCATGTACAAAGGCCTCAATCGAGCGGCCGCGACGCTCACCGGCGGCGGGCTGGCCGTCGGGGTCCATTGGATAGCGAGCAAGGCTGATCAGCATGGGGAGCTTGTGATTCTCAACGGCTCTGTCTTCATTCTTGCCGCAGTGGTGACTTTCACTCGGTTCGTTCCGGTGGTGAAGAGGAGATTCGACTATGGTGCGACCATATTCATCCTGACCTTCAGCCTGGTGGCGGTGTCGGGCTACAGAGTGAATGAACTCATCAATTTGGCTCAGCAGCGGCTCAGCACGGTTGCGATCGGGATCTCAATCTGCGTCGTCGTCTGCATGGTCATATGCCCGGTCTGGGCCGGCTCCGACCTCCACCTCCTCCTCGTTCGCAACTTGGACAAACTCGCTGACTCCGTAGAAGGTTGTGTAGAGGAGTACTTCTCTGGGAAGGAGGCTGGTCAAAAGGCAGACGGGTACAAGAGCGTTCTAAACTCCAAAGAATCAGAGGACTCGTTGGTAAATCTTGCACTATGGGAGCCCGGACACGGCCCATTTGGGTTCAGGCATCCATGGAGTCAGTACCAAAAGATCGGTGCAGCAATGAGGTCCTGTGCTCATCACATCGAAGCACTTCATGCTTCCTCTCAATCTGAAATCCAGGCTCCTGAGTTGATTAAGAAGCATATGAGCAAAGTTTGTATGAAAATGAGCTCAAAGTCATCAAAAGTCTTGAGAGAAGTCTCATCTTGCATTAAATATATGCAAAGGCCGTCTGATAAACTAAGCCTTCTGATTAAAGAGATGAAAGAAGCAAAGGAACAAATGAATTGTGCCTTAAAATATACTCTTTCGATTCAATATAAGGAAAATCATGAGTTGGGGTTGGAAATGGAAGATGATTATGATAACATGACAACAACGATGATGATGACGAGGCATTCATTGATGGAGTTTTTGTCATTTGTGGGTTTTATCTCAATTCTAAGAGATATCTCGATTAGGGTTGAAGGGATTGAAGAGGCAGTGGACAAACTAGCAAGGCTTGCTGATTTCAAGGCAACTGAAAACAAATTATAA

Network for GWHGAAEX006105

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11744.7	ALMT	51	391	3.40E-137

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0015743	Biological Process	malate transport

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.050
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	1.480
	SRR5643514	five period of Gastrodia elata	2.250
	SRR5643515	five period of Gastrodia elata	0.600
	SRR5643524	five period of Gastrodia elata	0.940
	SRR5643525	five period of Gastrodia elata	0.290
	SRR5643528	five period of Gastrodia elata	0.100
	SRR5643658	five period of Gastrodia elata	0.710
	SRR5643659	five period of Gastrodia elata	0.040
	SRR5643660	five period of Gastrodia elata	0.130
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.040
	SRR5643663	five period of Gastrodia elata	0.200
	SRR5643664	five period of Gastrodia elata	0.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.300
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.730
SRP279888	Gastro	Gastrodia elata tuber	0.34
	Juven	Juvenile tuber	4.84
	Mother_Gastro	Mother tuber of Gastrodia elata	2.64
	Mother_Juven	Mother tuber of Juvenile	0.72