Detail information of GWHGAAEX006106/evm.TU.scaffold_177.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00285.00E-45Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
nrgi|743777730|ref|XP_010919305.1|4.14E-51PREDICTED: calcium-binding protein KIC-like [Elaeis guineensis]
Swissprottr|Q9ZPX9|KIC_ARATH3.00E-45Calcium-binding protein KIC
trEMBLtr|A0A061DS74|A0A061DS74_THECC2.00E-49Calcium-binding EF-hand family protein {ECO:0000313|EMBL:EOX95644.1}
TAIRAT2G466005.00E-45Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018517631941764174+
Transcript Sequence

Network for GWHGAAEX006106

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_847982.70E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.150
SRR2545915Juvenile tuber6.670
SRP108465SRR5643513five period of Gastrodia elata39.600
SRR5643514five period of Gastrodia elata52.240
SRR5643515five period of Gastrodia elata35.600
SRR5643524five period of Gastrodia elata38.780
SRR5643525five period of Gastrodia elata258.330
SRR5643528five period of Gastrodia elata379.940
SRR5643658five period of Gastrodia elata164.560
SRR5643659five period of Gastrodia elata40.940
SRR5643660five period of Gastrodia elata48.000
SRR5643661five period of Gastrodia elata43.110
SRR5643662five period of Gastrodia elata73.370
SRR5643663five period of Gastrodia elata91.730
SRR5643664five period of Gastrodia elata93.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.770
SRR6049655Rhizomagastrodiae_C368-T10_good_121.210
SRR6049656Rhizomagastrodiae_C368-T07_good_134.650
SRR6049657Rhizomagastrodiae_C368-T07_good_125.980
SRR6049658Rhizomagastrodiae_C368-T04_good_122.530
SRR6049659Rhizomagastrodiae_C368-T04_good_126.370
SRR6049660Rhizomagastrodiae_C368-T01_good_119.040
SRR6049661Rhizomagastrodiae_C368-T04_good_120.590
SRR6049662Rhizomagastrodiae_C368-T01_good_126.920
SRR6049663Rhizomagastrodiae_C368-T01_good_112.750
SRR6049664Rhizomagastrodiae_C368-T10_good_150.650
SRR6049665Rhizomagastrodiae_C368-T10_good_150.650
SRP279888GastroGastrodia elata tuber 143.91
JuvenJuvenile tuber66.54
Mother_GastroMother tuber of Gastrodia elata 429.32
Mother_JuvenMother tuber of Juvenile 219.33