Detail information of GWHGAAEX006110/evm.TU.scaffold_177.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|56697985|ref|YP_168356.1|7.00E-11monooxygenase, putative [Ruegeria pomeroyi DSS-3]
KOGKOG05371.00E-57Cytochrome b5
nrgi|25044825|gb|AAM28288.1|6.73E-58cytochrome b5 [Ananas comosus]
Swissprottr|Q42342|CYB5E_ARATH3.00E-58Cytochrome b5 isoform E {ECO:0000303|PubMed:19054355}
trEMBLtr|Q8H293|Q8H293_ANACO3.00E-58Cytochrome b5 {ECO:0000313|EMBL:AAM28288.1}
TAIRAT5G535601.00E-57cytochrome B5 isoform E

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018518354051843955+
Transcript Sequence

Network for GWHGAAEX006110

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.27Cyt-b511805.20E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms108.050
SRR2545915Juvenile tuber52.470
SRP108465SRR5643513five period of Gastrodia elata55.510
SRR5643514five period of Gastrodia elata33.660
SRR5643515five period of Gastrodia elata35.280
SRR5643524five period of Gastrodia elata27.900
SRR5643525five period of Gastrodia elata17.590
SRR5643528five period of Gastrodia elata20.160
SRR5643658five period of Gastrodia elata16.400
SRR5643659five period of Gastrodia elata40.540
SRR5643660five period of Gastrodia elata46.180
SRR5643661five period of Gastrodia elata35.990
SRR5643662five period of Gastrodia elata33.190
SRR5643663five period of Gastrodia elata33.530
SRR5643664five period of Gastrodia elata31.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1116.960
SRR6049655Rhizomagastrodiae_C368-T10_good_1377.130
SRR6049656Rhizomagastrodiae_C368-T07_good_1137.220
SRR6049657Rhizomagastrodiae_C368-T07_good_1184.580
SRR6049658Rhizomagastrodiae_C368-T04_good_1226.420
SRR6049659Rhizomagastrodiae_C368-T04_good_1218.710
SRR6049660Rhizomagastrodiae_C368-T01_good_1210.240
SRR6049661Rhizomagastrodiae_C368-T04_good_1273.130
SRR6049662Rhizomagastrodiae_C368-T01_good_195.760
SRR6049663Rhizomagastrodiae_C368-T01_good_176.070
SRR6049664Rhizomagastrodiae_C368-T10_good_1102.000
SRR6049665Rhizomagastrodiae_C368-T10_good_1102.000
SRP279888GastroGastrodia elata tuber 40.63
JuvenJuvenile tuber118.67
Mother_GastroMother tuber of Gastrodia elata 73.69
Mother_JuvenMother tuber of Juvenile 57.41