Detail information of GWHGAAEX006113/evm.TU.scaffold_177.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720010720|ref|XP_010259336.1|5.16E-07PREDICTED: 60S ribosomal protein L29-1-like [Nelumbo nucifera]
trEMBLtr|M0RPJ8|M0RPJ8_MUSAM1.00E-06Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P05180_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018518960641899055+
Transcript Sequence

Network for GWHGAAEX006113

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02905RP-L29e, RPL29 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.730
SRR2545915Juvenile tuber59.930
SRP108465SRR5643513five period of Gastrodia elata8.100
SRR5643514five period of Gastrodia elata8.260
SRR5643515five period of Gastrodia elata6.880
SRR5643524five period of Gastrodia elata8.450
SRR5643525five period of Gastrodia elata13.060
SRR5643528five period of Gastrodia elata7.550
SRR5643658five period of Gastrodia elata11.390
SRR5643659five period of Gastrodia elata24.250
SRR5643660five period of Gastrodia elata31.720
SRR5643661five period of Gastrodia elata18.510
SRR5643662five period of Gastrodia elata18.440
SRR5643663five period of Gastrodia elata22.160
SRR5643664five period of Gastrodia elata30.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.680
SRR6049655Rhizomagastrodiae_C368-T10_good_11.900
SRR6049656Rhizomagastrodiae_C368-T07_good_17.360
SRR6049657Rhizomagastrodiae_C368-T07_good_111.290
SRR6049658Rhizomagastrodiae_C368-T04_good_110.430
SRR6049659Rhizomagastrodiae_C368-T04_good_113.030
SRR6049660Rhizomagastrodiae_C368-T01_good_18.220
SRR6049661Rhizomagastrodiae_C368-T04_good_114.400
SRR6049662Rhizomagastrodiae_C368-T01_good_14.520
SRR6049663Rhizomagastrodiae_C368-T01_good_15.860
SRR6049664Rhizomagastrodiae_C368-T10_good_13.890
SRR6049665Rhizomagastrodiae_C368-T10_good_13.890
SRP279888GastroGastrodia elata tuber 15.09
JuvenJuvenile tuber2.87
Mother_GastroMother tuber of Gastrodia elata 2.92
Mother_JuvenMother tuber of Juvenile 2.63