Detail information of GWHGAAEX006120/evm.TU.scaffold_177.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|6.00E-65trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10506.00E-162Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|743778079|ref|XP_010919491.1|0PREDICTED: probable trehalose-phosphate phosphatase F [Elaeis guineensis]
Swissprottr|O64896|TPPA_ARATH2.00E-162Trehalose-phosphate phosphatase A
trEMBLtr|M0SY80|M0SY80_MUSAM0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}
TAIRAT5G514606.00E-162Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018519500141955115-
Transcript Sequence

Network for GWHGAAEX006120

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase1183645.50E-71
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.640
SRR2545915Juvenile tuber14.210
SRP108465SRR5643513five period of Gastrodia elata16.790
SRR5643514five period of Gastrodia elata7.800
SRR5643515five period of Gastrodia elata56.200
SRR5643524five period of Gastrodia elata12.930
SRR5643525five period of Gastrodia elata26.190
SRR5643528five period of Gastrodia elata25.670
SRR5643658five period of Gastrodia elata25.220
SRR5643659five period of Gastrodia elata35.400
SRR5643660five period of Gastrodia elata15.840
SRR5643661five period of Gastrodia elata31.830
SRR5643662five period of Gastrodia elata22.960
SRR5643663five period of Gastrodia elata23.310
SRR5643664five period of Gastrodia elata22.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.100
SRR6049655Rhizomagastrodiae_C368-T10_good_19.690
SRR6049656Rhizomagastrodiae_C368-T07_good_19.850
SRR6049657Rhizomagastrodiae_C368-T07_good_110.120
SRR6049658Rhizomagastrodiae_C368-T04_good_16.110
SRR6049659Rhizomagastrodiae_C368-T04_good_16.620
SRR6049660Rhizomagastrodiae_C368-T01_good_111.790
SRR6049661Rhizomagastrodiae_C368-T04_good_16.510
SRR6049662Rhizomagastrodiae_C368-T01_good_110.890
SRR6049663Rhizomagastrodiae_C368-T01_good_116.370
SRR6049664Rhizomagastrodiae_C368-T10_good_110.410
SRR6049665Rhizomagastrodiae_C368-T10_good_110.410
SRP279888GastroGastrodia elata tuber 12.32
JuvenJuvenile tuber2.52
Mother_GastroMother tuber of Gastrodia elata 195.60
Mother_JuvenMother tuber of Juvenile 60.51