Detail information of GWHGAAEX006123/evm.TU.scaffold_177.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|460397847|ref|XP_004244478.1|2.99E-09PREDICTED: putative F-box protein At3g25750 isoform X1 [Solanum lycopersicum]
trEMBLtr|M1AKI0|M1AKI0_SOLTU8.00E-10Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400024686}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018519673291967760-
Transcript Sequence

Network for GWHGAAEX006123

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.440
SRR2545915Juvenile tuber7.210
SRP108465SRR5643513five period of Gastrodia elata8.690
SRR5643514five period of Gastrodia elata5.630
SRR5643515five period of Gastrodia elata17.360
SRR5643524five period of Gastrodia elata9.650
SRR5643525five period of Gastrodia elata18.710
SRR5643528five period of Gastrodia elata15.060
SRR5643658five period of Gastrodia elata16.050
SRR5643659five period of Gastrodia elata6.410
SRR5643660five period of Gastrodia elata8.030
SRR5643661five period of Gastrodia elata7.170
SRR5643662five period of Gastrodia elata10.390
SRR5643663five period of Gastrodia elata11.780
SRR5643664five period of Gastrodia elata9.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.890
SRR6049655Rhizomagastrodiae_C368-T10_good_15.620
SRR6049656Rhizomagastrodiae_C368-T07_good_18.260
SRR6049657Rhizomagastrodiae_C368-T07_good_113.320
SRR6049658Rhizomagastrodiae_C368-T04_good_111.650
SRR6049659Rhizomagastrodiae_C368-T04_good_114.870
SRR6049660Rhizomagastrodiae_C368-T01_good_18.230
SRR6049661Rhizomagastrodiae_C368-T04_good_114.190
SRR6049662Rhizomagastrodiae_C368-T01_good_19.300
SRR6049663Rhizomagastrodiae_C368-T01_good_16.350
SRR6049664Rhizomagastrodiae_C368-T10_good_19.760
SRR6049665Rhizomagastrodiae_C368-T10_good_19.760
SRP279888GastroGastrodia elata tuber 11.57
JuvenJuvenile tuber14.59
Mother_GastroMother tuber of Gastrodia elata 31.87
Mother_JuvenMother tuber of Juvenile 23.52