Detail information of GWHGAAEX006124/evm.TU.scaffold_177.103
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|220932112|ref|YP_002509020.1| | 1.00E-15 | histidine triad (HIT) protein [Halothermothrix orenii H 168] |
| KOG | KOG4359 | 3.00E-20 | Protein kinase C inhibitor-like protein |
| nr | gi|672127008|ref|XP_008786964.1| | 3.19E-76 | PREDICTED: histidine triad nucleotide-binding protein 3 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|P42856|ZB14_MAIZE | 3.00E-07 | 14 kDa zinc-binding protein |
| trEMBL | tr|A0A059C187|A0A059C187_EUCGR | 1.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:KCW71974.1} |
| TAIR | HSM20127162 | 3.00E-20 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000185 | 1969786 | 1975411 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006124
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF11969.7 | DcpS_C | 8 | 112 | 4.60E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K22966 | HINT4 | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Sulfur metabolism | map00920 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.430 |
| SRR2545915 | Juvenile tuber | 5.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.080 |
| SRR5643514 | five period of Gastrodia elata | 3.520 | |
| SRR5643515 | five period of Gastrodia elata | 3.990 | |
| SRR5643524 | five period of Gastrodia elata | 2.440 | |
| SRR5643525 | five period of Gastrodia elata | 4.570 | |
| SRR5643528 | five period of Gastrodia elata | 4.230 | |
| SRR5643658 | five period of Gastrodia elata | 3.970 | |
| SRR5643659 | five period of Gastrodia elata | 3.820 | |
| SRR5643660 | five period of Gastrodia elata | 3.180 | |
| SRR5643661 | five period of Gastrodia elata | 3.600 | |
| SRR5643662 | five period of Gastrodia elata | 4.100 | |
| SRR5643663 | five period of Gastrodia elata | 3.680 | |
| SRR5643664 | five period of Gastrodia elata | 4.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.230 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.100 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.870 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.710 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.830 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.830 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.88 |
| Juven | Juvenile tuber | 2.97 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.95 | |
| Mother_Juven | Mother tuber of Juvenile | 4.89 |