Gene detail

Detail information of GWHGAAEX006132/evm.TU.scaffold_178.3

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|89276325\|gb\|ABD66519.1\|	0	unknown [Gymnadenia conopsea]
Swissprot	tr\|Q9FHM0\|TBL17_ARATH	3.00E-179	Protein YLS7
trEMBL	tr\|Q207T1\|Q207T1_GYMCO	0	Putative uncharacterized protein {ECO:0000313\|EMBL:ABD66519.1}
TAIR	AT5G51640	1.00E-178	Plant protein of unknown function (DUF828)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000197	199777	201649	+

Transcript Sequence
>GWHTAAEX006132 TAAAAATCCCCTTTTTATGTTCTTAATCTAATTCGGTTTACTCGGTGAAAAGCATCTCCCGAAGCCACGCTTTTCTCTACCCTCGATCTCGCTTCCATTCGCTCATTCGAACTCTGCCGGCCAAAACACCTCCTTTCTCTCGAAATGTGAATCAATCCCCCACAAACGATGACGACAAACGCTCATAAGAGCAACAACTCCGAAGCTATGGTGGTTCCTCGATCCATTTCTTCCATAGCCGCCGTAGTCAGCGTTTTGGCTATCCTTCTTATGCTTTCGACAATCGCACCGAGATTCTCAACTCCGGGTCTATATCATATCAGGAAGGCCAAAACTTATTTATTAAGAATGACGTTTCTGGTTTCGGAAATTATGACGGTAATTCGTCTGCTTCGACTTTTAATCCAGACTGCTCAAAAGAATGCGATCTTTATATTGGCAAATGGATTTATGACAATATGGGGCCTTTGTATACAAACAGAAGCTGCCCTTTTATCACTCAGACGCAGAATTGTCAGGGAAATGGGAGGCCAGACAGAGATTATGAGAACTGGAGGTGGAAACCAGATCGATGCGAGCTTCCCCGGTTTGACGGAAGGAGGTTCTTAGAGATTATGAGGGGTAAGACACTTGCTTTTGTCGGGGACTCGGTTTCTAGGAATCAGATGGAGTCGCTTCTTTGCATTCTTTGGCAGGTTGAAATTCCTAAGAACCGTGGCAATCGAAGAATGCATCGATGGCATTTCAGATCAACATCGACTATGATTGTGCGCATATGGTCGTCTTGGCTTGTTCATAAGACATTAGAGCCAATGGGTTTTGCTGATGAGGGTGTTGTGAAGGTTCATTTAGATATTCCTGACGAGAGTTTTATGGAATTTCTCCCGGGATTTGATGTAGTAGTACTTTCATCAGGACATTGGTTTGCAAAGCCATCTGTTTATGTTATCAATGGAACAATTGTAGGCAGCCAATTATGGAAACCTCCTAAAAATTCAAATTTGAACATGAGGATCAACAACAGCGAGGCCTTCGGCGTGTCAGTGGGGACGGCATTGAAAGCAGTTGCTGCTCATCCGAATTTCACCGGCCTTGCTATCGTTCGGTCATATTCACCGGATCATTATGATGGGGGTGCTTGGAATGCTGGTGGATCTTGCACTGGAAAAGTTAGTCCTGTAAATCAGGTGTTCAGAAATGGATTTACAGATGCCATGCATAATAAGCAACTTGCAGGCTTTGAACGAGTTGTCAAGATTGCGAGTCATAATTCCAAATTTATATTTATGGACATAACAGAGGTTTTTGGCTATCGACCTGATGGTCATCCAGGGCCTTATAGGAGTCCAGATCCAAATAAGAAGACTGCCAGAGGACCAAATGGTAAGCCGCCTCCACAAGACTGCCTTCACTGGTGCATGCCGGGACCAGTTGATACATGGAATGAGTTTTTATTGGAAATAATTTTGAAGAGATTTTAGAGAATTATGGTGCAGAGCCTTAAAGTTCTGGCTTGCTTTTCAAAAACACAAGTGCATTATTCAGTGTTGGTGAGATGTATGTAGCAAGAGTAATAATTAAATACTCGCAGGAGTTATATCAATTATGAACCAGTCCACATGTCAGACATTATAGCAACTTTGTATTGTTAATATAACATTTATATTATTTCAAACGTTCTTTTACTTACTGTACATGTCACTTGATGCAAAGTTTGAGATTGTAGTAACGCATTCAAAAACATTGTTTTTTTTAAATTAAGATTAAAAAACTCATGTGATTCACTAG

Network for GWHGAAEX006132

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14416.5	PMR5N	3	40	2.60E-15
PF13839.5	PC-Esterase	41	334	9.90E-78

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.360
SRP064423	SRR2545915	Juvenile tuber	10.730
SRP108465	SRR5643513	five period of Gastrodia elata	7.470
	SRR5643514	five period of Gastrodia elata	8.680
	SRR5643515	five period of Gastrodia elata	8.340
	SRR5643524	five period of Gastrodia elata	9.840
	SRR5643525	five period of Gastrodia elata	13.550
	SRR5643528	five period of Gastrodia elata	19.580
	SRR5643658	five period of Gastrodia elata	9.990
	SRR5643659	five period of Gastrodia elata	9.920
	SRR5643660	five period of Gastrodia elata	7.930
	SRR5643661	five period of Gastrodia elata	11.000
	SRR5643662	five period of Gastrodia elata	11.370
	SRR5643663	five period of Gastrodia elata	9.300
	SRR5643664	five period of Gastrodia elata	11.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.060
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.760
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.450
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.430
SRP279888	Gastro	Gastrodia elata tuber	6.79
	Juven	Juvenile tuber	7.42
	Mother_Gastro	Mother tuber of Gastrodia elata	30.18
	Mother_Juven	Mother tuber of Juvenile	17.33