Detail information of GWHGAAEX006137/evm.TU.scaffold_178.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|426401089|ref|YP_007020061.1|8.00E-42NADH-quinone oxidoreductase subunit B [Candidatus Endolissoclinum faulkneri L2]
KOGKOG16875.00E-54NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit
nrgi|147818797|emb|CAN67285.1|1.74E-68hypothetical protein VITISV_021597 [Vitis vinifera]
Swissprottr|P42027|NDUS7_BRAOL6.00E-61NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (Precursor)
trEMBLtr|A5AY34|A5AY34_VITVI6.00E-69Putative uncharacterized protein {ECO:0000313|EMBL:CAN67285.1}
TAIRAT5G117705.00E-54NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000197288633289031+
Transcript Sequence

Network for GWHGAAEX006137

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03940NDUFS7 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.490
SRR2545915Juvenile tuber33.560
SRP108465SRR5643513five period of Gastrodia elata52.760
SRR5643514five period of Gastrodia elata59.560
SRR5643515five period of Gastrodia elata41.890
SRR5643524five period of Gastrodia elata53.660
SRR5643525five period of Gastrodia elata72.500
SRR5643528five period of Gastrodia elata91.320
SRR5643658five period of Gastrodia elata96.270
SRR5643659five period of Gastrodia elata44.770
SRR5643660five period of Gastrodia elata55.400
SRR5643661five period of Gastrodia elata50.530
SRR5643662five period of Gastrodia elata51.060
SRR5643663five period of Gastrodia elata43.210
SRR5643664five period of Gastrodia elata49.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.640
SRR6049655Rhizomagastrodiae_C368-T10_good_171.930
SRR6049656Rhizomagastrodiae_C368-T07_good_194.880
SRR6049657Rhizomagastrodiae_C368-T07_good_177.220
SRR6049658Rhizomagastrodiae_C368-T04_good_1116.410
SRR6049659Rhizomagastrodiae_C368-T04_good_1140.010
SRR6049660Rhizomagastrodiae_C368-T01_good_195.800
SRR6049661Rhizomagastrodiae_C368-T04_good_1107.230
SRR6049662Rhizomagastrodiae_C368-T01_good_1153.910
SRR6049663Rhizomagastrodiae_C368-T01_good_1153.200
SRR6049664Rhizomagastrodiae_C368-T10_good_1135.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1135.360
SRP279888GastroGastrodia elata tuber 194.12
JuvenJuvenile tuber97.36
Mother_GastroMother tuber of Gastrodia elata 140.90
Mother_JuvenMother tuber of Juvenile 88.98