Detail information of GWHGAAEX006142/evm.TU.scaffold_178.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743755448|ref|XP_010910484.1|4.72E-87PREDICTED: protein EARLY FLOWERING 3 [Elaeis guineensis]
Swissprottr|O82804|ELF3_ARATH3.00E-27Protein EARLY FLOWERING 3
trEMBLtr|K3Z440|K3Z440_SETIT7.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:Si021308m}
TAIRAT2G259301.00E-26hydroxyproline-rich glycoprotein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000197392573420085+
Transcript Sequence

Network for GWHGAAEX006142

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12125ELF3 Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.410
SRR2545915Juvenile tuber45.120
SRP108465SRR5643513five period of Gastrodia elata20.390
SRR5643514five period of Gastrodia elata19.330
SRR5643515five period of Gastrodia elata22.700
SRR5643524five period of Gastrodia elata17.300
SRR5643525five period of Gastrodia elata35.270
SRR5643528five period of Gastrodia elata36.060
SRR5643658five period of Gastrodia elata47.460
SRR5643659five period of Gastrodia elata36.390
SRR5643660five period of Gastrodia elata44.530
SRR5643661five period of Gastrodia elata33.630
SRR5643662five period of Gastrodia elata33.240
SRR5643663five period of Gastrodia elata42.670
SRR5643664five period of Gastrodia elata42.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.980
SRR6049655Rhizomagastrodiae_C368-T10_good_130.730
SRR6049656Rhizomagastrodiae_C368-T07_good_124.920
SRR6049657Rhizomagastrodiae_C368-T07_good_128.760
SRR6049658Rhizomagastrodiae_C368-T04_good_128.500
SRR6049659Rhizomagastrodiae_C368-T04_good_132.420
SRR6049660Rhizomagastrodiae_C368-T01_good_123.550
SRR6049661Rhizomagastrodiae_C368-T04_good_128.200
SRR6049662Rhizomagastrodiae_C368-T01_good_119.460
SRR6049663Rhizomagastrodiae_C368-T01_good_121.070
SRR6049664Rhizomagastrodiae_C368-T10_good_124.190
SRR6049665Rhizomagastrodiae_C368-T10_good_124.190
SRP279888GastroGastrodia elata tuber 33.53
JuvenJuvenile tuber16.60
Mother_GastroMother tuber of Gastrodia elata 28.38
Mother_JuvenMother tuber of Juvenile 17.34