Gene detail

Detail information of GWHGAAEX006154/evm.TU.scaffold_178.32

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|159900690\|ref\|YP_001546937.1\|	5.00E-38	cytochrome P450 [Herpetosiphon aurantiacus DSM 785]
KOG	KOG0156	1.00E-118	Cytochrome P450 CYP2 subfamily
nr	gi\|643732064\|gb\|KDP39256.1\|	1.05E-158	hypothetical protein JCGZ_01013 [Jatropha curcas]
Swissprot	tr\|O48923\|C71DA_SOYBN	3.00E-153	Cytochrome P450 71D10
trEMBL	tr\|A0A067KST9\|A0A067KST9_JATCU	4.00E-159	Uncharacterized protein {ECO:0000313\|EMBL:KDP39256.1}
TAIR	AT5G25140	1.00E-118	cytochrome P450, family 71, subfamily B, polypeptide 13

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000197	765876	767720	+

Transcript Sequence
>GWHTAAEX006154 ATGGAGCTCGGATGCGTTGTGTCACTTTTGGTCCTCTTTCTCACTCTCTCAGCCATTGCAATAAAAAAATTCAAATCACAACGGCAGGCCAAGCGATCTCAGCCACCAGGCCCAAGGAATCTTCCCTTCATAGGCTGCATCCACCGTCTGCTGACCCAAGAGCCCATCTACAAGATCTTGAACAGGCTCTCCTCCACTTACGGCCCGATCATGCGGCTCAAACTGGGGGAGATCAACGTGGCAGTGATCTCCACCGCAGACGGCGCGAGAGAGATACTGAGGACGCAGGACCTGGCCTTCGCATCGCGGCCCATCCGATCGACGGTCAGGATCATCGGGTACGGAGACAAAGAATTGGTCTTCGCTCCCTATGGCAAGTACTGGCGGCAAATGCGTCGGCTGTGCGCCACCGAGCTTTTCTCGGCCAAGCGCGTGCGATGCTTTCGGGGGATAAGAGAGCAGGAGGTGGGGAGCATGATCCGGTGCCTCGCAGGTGCAACGGAAGCCGTTGACCTCAGCGAGATGCTGACGCGTGTCGTTAATAATATCACGGCGAGGGCCGTCGTCGGCGGAAAGATTGCCAACCTTAAGCTGTTCCTGTCCGTCCTCGCAGAGACGGTAGAGCTACTGGCCAGCTTCACTGTTGCCGATGTCTTCCCATCCATCCCCTTCTTACCTCGACTCACAGGCGTTCGCCGCAAGCTGGAGCAGTGCCATCAAAAGATTGATGATATGAGCGAAGAAATTATTCGAGAGCATAAGAGAATGAGGGATAATATTTGCACAGACGAAGATATAACTGATGTTCTTCTTAAAATCCAAAGAGATGGCAACCTTCAGTTCCCGCTCTCTAATGATCACATCAAAGCTGTCATCATTGATTTGCTGATGGCCGGAACGGAGACAACATCGACCGGAATAGAATGGGCAATGTCAGAGCTAATTCGAAACCCAGCCATAATGACAAAGGTGCAAAAGGAGGTGAGGGAGGTGTTTGAAGGCAGCAAAATGACACGGATAGTAGCAGAAGAAAAATTAATGAACGGTGAAAATCTTAGCTACTTGCAGGCAATCATTAAGGAGACTCTGCGACTGCACCCTCCATTACCATTAGTTCCGCCAAGGCAAAATCAAGAGAGGTGTGAAGTGATGGGATATGAGATTCCAGCAAAAACTACGGTTCTAATAAATGCATGGAAAATAGGAAGGGACCCTAAATATTGGGAAGACCCAAATGTCTTTCGGCCTGAGAGGTTCATGGGAAATGATGTTGATTTCAGAGGGAGTAATTTTGAGTTTATACCATTTGGTGCAGGTAGAAGAATATGTCCTGGCATGCAATTTGGGTTGACAACTTTTGAAATGATCCTTGCGCATATGCTTTATTATTTCGATTGGAAGTATCCAACCATGCAAATTGAAAAGGATCCATTGGATATGACTGAAGCTCCAGGGTTTACATTAAAAAGGAAATCTCCCCTTTGTCTGTTGCCCATTCCTCGCATTCCTCTCCCCATATAGTTCATGGAAGCCTAGACTTCATCTTCTTTGATATTTGAAACTTTATGTTATTTTATGCAAGTTAAAGTATATTCC

Network for GWHGAAEX006154

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	35	491	1.30E-99

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B13

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	2.440
	SRR5643515	five period of Gastrodia elata	0.240
	SRR5643524	five period of Gastrodia elata	0.850
	SRR5643525	five period of Gastrodia elata	0.050
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	2.000
	SRR5643660	five period of Gastrodia elata	1.000
	SRR5643661	five period of Gastrodia elata	0.280
	SRR5643662	five period of Gastrodia elata	0.320
	SRR5643663	five period of Gastrodia elata	1.040
	SRR5643664	five period of Gastrodia elata	0.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.450
SRP279888	Gastro	Gastrodia elata tuber	0.47
	Juven	Juvenile tuber	0.09
	Mother_Gastro	Mother tuber of Gastrodia elata	0.02
	Mother_Juven	Mother tuber of Juvenile	0.00