Detail information of GWHGAAEX006155/evm.TU.scaffold_178.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25002.00E-97Uncharacterized conserved protein
nrgi|720070508|ref|XP_010277761.1|3.90E-111PREDICTED: uncharacterized protein At1g03900 [Nelumbo nucifera]
Swissprottr|Q681Q7|Y1390_ARATH5.00E-39Uncharacterized protein At1g03900
trEMBLtr|W1Q0Z1|W1Q0Z1_AMBTC1.00E-108Uncharacterized protein {ECO:0000313|EMBL:ERN13915.1}
TAIRAT3G586002.00E-97Adaptin ear-binding coat-associated protein 1 NECAP-1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000197801407810849+
Transcript Sequence

Network for GWHGAAEX006155

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07933.13DUF1681371961.40E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006897Biological Processendocytosis
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.890
SRR2545915Juvenile tuber48.220
SRP108465SRR5643513five period of Gastrodia elata45.840
SRR5643514five period of Gastrodia elata51.810
SRR5643515five period of Gastrodia elata50.750
SRR5643524five period of Gastrodia elata48.200
SRR5643525five period of Gastrodia elata41.900
SRR5643528five period of Gastrodia elata32.630
SRR5643658five period of Gastrodia elata45.090
SRR5643659five period of Gastrodia elata76.000
SRR5643660five period of Gastrodia elata74.080
SRR5643661five period of Gastrodia elata63.200
SRR5643662five period of Gastrodia elata53.710
SRR5643663five period of Gastrodia elata71.290
SRR5643664five period of Gastrodia elata67.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.020
SRR6049655Rhizomagastrodiae_C368-T10_good_158.660
SRR6049656Rhizomagastrodiae_C368-T07_good_144.720
SRR6049657Rhizomagastrodiae_C368-T07_good_146.550
SRR6049658Rhizomagastrodiae_C368-T04_good_145.890
SRR6049659Rhizomagastrodiae_C368-T04_good_145.300
SRR6049660Rhizomagastrodiae_C368-T01_good_148.080
SRR6049661Rhizomagastrodiae_C368-T04_good_139.150
SRR6049662Rhizomagastrodiae_C368-T01_good_141.770
SRR6049663Rhizomagastrodiae_C368-T01_good_149.540
SRR6049664Rhizomagastrodiae_C368-T10_good_148.340
SRR6049665Rhizomagastrodiae_C368-T10_good_148.340
SRP279888GastroGastrodia elata tuber 65.34
JuvenJuvenile tuber84.13
Mother_GastroMother tuber of Gastrodia elata 48.37
Mother_JuvenMother tuber of Juvenile 55.75