Detail information of GWHGAAEX006162/evm.TU.scaffold_178.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158338259|ref|YP_001519436.1| | 1.00E-57 | cytochrome P450 family protein [Acaryochloris marina MBIC11017] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|672125231|ref|XP_008786029.1| | 0 | PREDICTED: cytochrome P450 85A1-like [Phoenix dactylifera] |
| Swissprot | tr|Q8GSQ1|C85A1_ORYSJ | 0 | Cytochrome P450 85A1 |
| trEMBL | tr|M0T2V2|M0T2V2_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P00040_001} |
| TAIR | AT5G38970 | 0 | brassinosteroid-6-oxidase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000197 | 994176 | 997314 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006162
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 36 | 441 | 8.30E-58 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP85A1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09590 | CYP85A1, BR6OX1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004497 | Molecular Function | monooxygenase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.810 |
| SRR2545915 | Juvenile tuber | 6.140 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.350 |
| SRR5643514 | five period of Gastrodia elata | 6.680 | |
| SRR5643515 | five period of Gastrodia elata | 2.450 | |
| SRR5643524 | five period of Gastrodia elata | 3.770 | |
| SRR5643525 | five period of Gastrodia elata | 2.630 | |
| SRR5643528 | five period of Gastrodia elata | 1.880 | |
| SRR5643658 | five period of Gastrodia elata | 2.580 | |
| SRR5643659 | five period of Gastrodia elata | 1.600 | |
| SRR5643660 | five period of Gastrodia elata | 1.450 | |
| SRR5643661 | five period of Gastrodia elata | 1.080 | |
| SRR5643662 | five period of Gastrodia elata | 0.720 | |
| SRR5643663 | five period of Gastrodia elata | 0.950 | |
| SRR5643664 | five period of Gastrodia elata | 0.950 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.510 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.880 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.530 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.740 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.10 |
| Juven | Juvenile tuber | 4.92 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.02 | |
| Mother_Juven | Mother tuber of Juvenile | 8.49 |