Detail information of GWHGAAEX006179/evm.TU.scaffold_178.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672107073|ref|XP_008792664.1|1.43E-20PREDICTED: arabinogalactan peptide 16-like [Phoenix dactylifera]
Swissprottr|Q9M373|AGP20_ARATH9.00E-17Arabinogalactan peptide 20 (Precursor)
trEMBLtr|M0SJL2|M0SJL2_MUSAM5.00E-18Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P31980_001}
TAIRAT3G616403.00E-16arabinogalactan protein 20

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019713291361332542-
Transcript Sequence

Network for GWHGAAEX006179

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module10

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06376.11AGP30628.60E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.600
SRR2545915Juvenile tuber30.780
SRP108465SRR5643513five period of Gastrodia elata232.840
SRR5643514five period of Gastrodia elata263.340
SRR5643515five period of Gastrodia elata159.780
SRR5643524five period of Gastrodia elata50.420
SRR5643525five period of Gastrodia elata107.430
SRR5643528five period of Gastrodia elata100.280
SRR5643658five period of Gastrodia elata130.710
SRR5643659five period of Gastrodia elata129.920
SRR5643660five period of Gastrodia elata48.890
SRR5643661five period of Gastrodia elata128.590
SRR5643662five period of Gastrodia elata348.500
SRR5643663five period of Gastrodia elata113.110
SRR5643664five period of Gastrodia elata136.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1323.940
SRR6049655Rhizomagastrodiae_C368-T10_good_11602.520
SRR6049656Rhizomagastrodiae_C368-T07_good_1350.850
SRR6049657Rhizomagastrodiae_C368-T07_good_1270.930
SRR6049658Rhizomagastrodiae_C368-T04_good_1138.820
SRR6049659Rhizomagastrodiae_C368-T04_good_1105.640
SRR6049660Rhizomagastrodiae_C368-T01_good_1132.150
SRR6049661Rhizomagastrodiae_C368-T04_good_1224.860
SRR6049662Rhizomagastrodiae_C368-T01_good_1269.740
SRR6049663Rhizomagastrodiae_C368-T01_good_1259.720
SRR6049664Rhizomagastrodiae_C368-T10_good_1350.670
SRR6049665Rhizomagastrodiae_C368-T10_good_1350.670
SRP279888GastroGastrodia elata tuber 325.18
JuvenJuvenile tuber353.70
Mother_GastroMother tuber of Gastrodia elata 53.22
Mother_JuvenMother tuber of Juvenile 78.42