Detail information of GWHGAAEX006194/evm.TU.scaffold_178.76
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|402773341|ref|YP_006592878.1| | 2.00E-32 | hypothetical protein BN69_2776 [Methylocystis sp. SC2] |
| KOG | KOG2730 | 3.00E-65 | Methylase |
| nr | gi|672157675|ref|XP_008798555.1| | 5.37E-119 | PREDICTED: uncharacterized protein LOC103713414 isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|A0A067KTP4|A0A067KTP4_JATCU | 5.00E-106 | Uncharacterized protein {ECO:0000313|EMBL:KDP38328.1} |
| TAIR | AT1G30550 | 3.00E-65 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000197 | 1573280 | 1608671 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006194
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF09445.9 | Methyltransf_15 | 640 | 768 | 7.40E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14292 | TGS1 | RNA transport | map03013 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009452 | Biological Process | 7-methylguanosine RNA capping |
| GO:0001510 | Biological Process | RNA methylation |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008168 | Molecular Function | methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 32.260 |
| SRR2545915 | Juvenile tuber | 25.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.370 |
| SRR5643514 | five period of Gastrodia elata | 6.520 | |
| SRR5643515 | five period of Gastrodia elata | 8.070 | |
| SRR5643524 | five period of Gastrodia elata | 7.700 | |
| SRR5643525 | five period of Gastrodia elata | 12.770 | |
| SRR5643528 | five period of Gastrodia elata | 14.970 | |
| SRR5643658 | five period of Gastrodia elata | 17.880 | |
| SRR5643659 | five period of Gastrodia elata | 11.280 | |
| SRR5643660 | five period of Gastrodia elata | 13.050 | |
| SRR5643661 | five period of Gastrodia elata | 12.900 | |
| SRR5643662 | five period of Gastrodia elata | 11.910 | |
| SRR5643663 | five period of Gastrodia elata | 12.110 | |
| SRR5643664 | five period of Gastrodia elata | 10.380 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.180 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 38.010 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 30.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 40.210 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.810 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.36 |
| Juven | Juvenile tuber | 29.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.71 | |
| Mother_Juven | Mother tuber of Juvenile | 28.45 |