Detail information of GWHGAAEX006206/evm.TU.scaffold_178.91
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428780491|ref|YP_007172277.1| | 3.00E-46 | phospho-N-acetylmuramoyl-pentapeptide-transferase [Dactylococcopsis salina PCC 8305] |
| nr | gi|743770560|ref|XP_010915567.1| | 2.37E-164 | PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O49730|MRAY_ARATH | 4.00E-103 | Phospho-N-acetylmuramoyl-pentapeptide-transferase homolog |
| trEMBL | tr|A0A067GHL3|A0A067GHL3_CITSI | 2.00E-153 | Uncharacterized protein {ECO:0000313|EMBL:KDO78155.1} |
| TAIR | AT4G18270 | 5.00E-27 | translocase 11 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000197 | 1841462 | 1888178 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006206
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00953.20 | Glycos_transf_4 | 260 | 428 | 5.90E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01000 | mraY | Metabolic pathways | map01100 |
| Peptidoglycan biosynthesis | map00550 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008963 | Molecular Function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.160 |
| SRR2545915 | Juvenile tuber | 8.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.690 |
| SRR5643514 | five period of Gastrodia elata | 3.030 | |
| SRR5643515 | five period of Gastrodia elata | 3.270 | |
| SRR5643524 | five period of Gastrodia elata | 2.940 | |
| SRR5643525 | five period of Gastrodia elata | 4.980 | |
| SRR5643528 | five period of Gastrodia elata | 4.400 | |
| SRR5643658 | five period of Gastrodia elata | 4.370 | |
| SRR5643659 | five period of Gastrodia elata | 3.950 | |
| SRR5643660 | five period of Gastrodia elata | 3.590 | |
| SRR5643661 | five period of Gastrodia elata | 4.820 | |
| SRR5643662 | five period of Gastrodia elata | 4.650 | |
| SRR5643663 | five period of Gastrodia elata | 4.900 | |
| SRR5643664 | five period of Gastrodia elata | 4.670 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.950 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.200 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.770 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.530 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.580 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.51 |
| Juven | Juvenile tuber | 6.12 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.63 | |
| Mother_Juven | Mother tuber of Juvenile | 4.53 |