Detail information of GWHGAAEX006231/evm.TU.scaffold_179.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307154785|ref|YP_003890169.1| | 0 | aldehyde dehydrogenase [Cyanothece sp. PCC 7822] |
| KOG | KOG2450 | 0 | Aldehyde dehydrogenase |
| nr | gi|743754950|ref|XP_010926163.1| | 0 | PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Elaeis guineensis] |
| Swissprot | tr|Q56YU0|AL2C4_ARATH | 0 | Aldehyde dehydrogenase family 2 member C4 |
| trEMBL | tr|M0T1G7|M0T1G7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P24920_001} |
| TAIR | AT1G23800 | 0 | aldehyde dehydrogenase 2B7 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000174 | 715272 | 719455 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006231
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00171.21 | Aldedh | 26 | 486 | 4.50E-177 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K12355 | REF1 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006081 | Biological Process | cellular aldehyde metabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016620 | Molecular Function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 644.920 |
| SRR2545915 | Juvenile tuber | 236.130 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 246.640 |
| SRR5643514 | five period of Gastrodia elata | 290.140 | |
| SRR5643515 | five period of Gastrodia elata | 437.270 | |
| SRR5643524 | five period of Gastrodia elata | 484.540 | |
| SRR5643525 | five period of Gastrodia elata | 1214.980 | |
| SRR5643528 | five period of Gastrodia elata | 2970.570 | |
| SRR5643658 | five period of Gastrodia elata | 1065.720 | |
| SRR5643659 | five period of Gastrodia elata | 352.400 | |
| SRR5643660 | five period of Gastrodia elata | 216.710 | |
| SRR5643661 | five period of Gastrodia elata | 227.140 | |
| SRR5643662 | five period of Gastrodia elata | 94.990 | |
| SRR5643663 | five period of Gastrodia elata | 134.770 | |
| SRR5643664 | five period of Gastrodia elata | 111.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 188.240 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 199.890 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 218.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 500.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 794.470 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1177.690 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 384.790 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 746.430 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 176.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 201.220 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 209.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 209.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 206.23 |
| Juven | Juvenile tuber | 156.90 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3,487.19 | |
| Mother_Juven | Mother tuber of Juvenile | 2,574.17 |