Detail information of GWHGAAEX006233/evm.TU.scaffold_179.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08712.00E-83Class 2 transcription repressor NC2, beta subunit (Dr1)
nrgi|695000127|ref|XP_009410380.1|2.09E-95PREDICTED: protein Dr1 homolog [Musa acuminata subsp. malaccensis]
Swissprottr|P49592|NC2B_ARATH7.00E-84Protein Dr1 homolog
trEMBLtr|M0TWD6|M0TWD6_MUSAM2.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P00790_001}
TAIRAT5G230902.00E-83nuclear factor Y, subunit B13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000174829868853639+
Transcript Sequence

Network for GWHGAAEX006233

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.22CBFD_NFYB_HMF15797.30E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.690
SRR2545915Juvenile tuber40.100
SRP108465SRR5643513five period of Gastrodia elata37.120
SRR5643514five period of Gastrodia elata41.950
SRR5643515five period of Gastrodia elata38.510
SRR5643524five period of Gastrodia elata39.600
SRR5643525five period of Gastrodia elata47.030
SRR5643528five period of Gastrodia elata39.370
SRR5643658five period of Gastrodia elata41.140
SRR5643659five period of Gastrodia elata41.140
SRR5643660five period of Gastrodia elata42.440
SRR5643661five period of Gastrodia elata40.910
SRR5643662five period of Gastrodia elata34.940
SRR5643663five period of Gastrodia elata35.940
SRR5643664five period of Gastrodia elata42.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.980
SRR6049655Rhizomagastrodiae_C368-T10_good_126.520
SRR6049656Rhizomagastrodiae_C368-T07_good_127.500
SRR6049657Rhizomagastrodiae_C368-T07_good_125.350
SRR6049658Rhizomagastrodiae_C368-T04_good_120.930
SRR6049659Rhizomagastrodiae_C368-T04_good_126.230
SRR6049660Rhizomagastrodiae_C368-T01_good_124.150
SRR6049661Rhizomagastrodiae_C368-T04_good_121.760
SRR6049662Rhizomagastrodiae_C368-T01_good_130.870
SRR6049663Rhizomagastrodiae_C368-T01_good_128.430
SRR6049664Rhizomagastrodiae_C368-T10_good_137.770
SRR6049665Rhizomagastrodiae_C368-T10_good_137.770
SRP279888GastroGastrodia elata tuber 54.40
JuvenJuvenile tuber19.15
Mother_GastroMother tuber of Gastrodia elata 37.67
Mother_JuvenMother tuber of Juvenile 19.65