Detail information of GWHGAAEX006235/evm.TU.scaffold_179.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|460416248|ref|XP_004253458.1|3.53E-10PREDICTED: nudix hydrolase 1-like [Solanum lycopersicum]
Swissprottr|Q9CA40|NUDT1_ARATH1.00E-10Nudix hydrolase 1
trEMBLtr|K4ARM4|K4ARM4_SOLLC1.00E-10Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc00g128870.2.1}
TAIRAT1G687605.00E-10nudix hydrolase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000174864998865204+
Transcript Sequence

Network for GWHGAAEX006235

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.500
SRR2545915Juvenile tuber15.660
SRP108465SRR5643513five period of Gastrodia elata86.000
SRR5643514five period of Gastrodia elata43.580
SRR5643515five period of Gastrodia elata60.950
SRR5643524five period of Gastrodia elata19.490
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata16.850
SRR5643658five period of Gastrodia elata34.910
SRR5643659five period of Gastrodia elata16.520
SRR5643660five period of Gastrodia elata22.050
SRR5643661five period of Gastrodia elata32.560
SRR5643662five period of Gastrodia elata35.670
SRR5643663five period of Gastrodia elata70.740
SRR5643664five period of Gastrodia elata75.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_184.300
SRR6049655Rhizomagastrodiae_C368-T10_good_1138.310
SRR6049656Rhizomagastrodiae_C368-T07_good_139.880
SRR6049657Rhizomagastrodiae_C368-T07_good_188.490
SRR6049658Rhizomagastrodiae_C368-T04_good_1118.850
SRR6049659Rhizomagastrodiae_C368-T04_good_134.670
SRR6049660Rhizomagastrodiae_C368-T01_good_128.110
SRR6049661Rhizomagastrodiae_C368-T04_good_120.530
SRR6049662Rhizomagastrodiae_C368-T01_good_152.160
SRR6049663Rhizomagastrodiae_C368-T01_good_151.340
SRR6049664Rhizomagastrodiae_C368-T10_good_149.380
SRR6049665Rhizomagastrodiae_C368-T10_good_149.380
SRP279888GastroGastrodia elata tuber 227.05
JuvenJuvenile tuber199.41
Mother_GastroMother tuber of Gastrodia elata 347.03
Mother_JuvenMother tuber of Juvenile 220.41