Gene detail

Detail information of GWHGAAEX006239/CADD00502.3.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000174	918146	939773	+

Transcript Sequence
>GWHTAAEX006239 CCAGTTTGGTGAGAATGATTTTGTGCAAAGAGCTGGATAAGGCACATGCGAAGTGACAGATTGGATCAATGTGCTTTCAAATCATGTGTTTTCATTCAGGTTTAACTGGTAAAGTATTGTTCACGTGATGGAGTGGAGTAATACATTTAAAAACATGAAAGGCCCAGGTTTGAGCTCAATTCAAGCCCAGGTTCAAGTTAAATATGCGATGAGGCCGAGCCGATTTGGGCTGCCTGAGTCTCATGTCTTGCAATCGAGTAATGATCAAACTTGAGCTCACACTATTCAAGCTTGCTTTGAGCTCGAACCATACTCAAGCCATATAAAGTTGAATTCAAGTACAGATATGGAGACCAAATCTATGATTGACATGGCACTTATACCCTATATAGAGCCTTTGGATGTTACACCTGGACCTTCGGTCAAAGGAACTGTTTCTCCAGCGCCAAAGCCTAGGAAGAAGTCCATGACTTCTTTGTTTCTCAAGTTCTTCGAAGTTGCTTCTGATGGGAAGACTAGAAGGTGCAAATTTTGCAAGCAAAGCTATTCTATAGCTACCGCTACAGGGAATCTTGGTCGACATCTCAATCACCGGCATCCGGGATATGATACGCTGAGTGATGCTTCCCAGTATGCGGCAGAAGGTTCCATCTCTCCTAAGAAATCTCTTCCTCCACTGAAATCTTCAGCTCTTGATTTCGATCATTTAAACTTATTATTGCTCAAGTGGCACATTGGAGCATCAATTCCTTCTTCAGTGTTTGAGGATGATATGTTCTTGAATTTCCTCAAGTTTTTCAATCCATCACTGGCTCTCTGGTCCCCAGAAAAATTTTACTCCGCCGCATCGGAAGTCTTCAGAAGCATGCAAGAAGATGTGAAAATGTCTTTGGAGCGCATCAGCTCCAAGGTTTCTATTACTTTGGATTTCTGGACTTCCCAGGAAGAATTGTACTACATGTTTGTTTATTGTCACTGGATTGATGAGAACTGGTTCTCGCACAAAGTTGCTCTCGATGTTCGTCGGATTTGTTATCCCTGCACAGGTCAGGAGATCTTTCTCGCCATTGTAGAAATTCTCAGAATGTTTAATCTTGAAAAAAGGGTTCTCTCCTGCACTAACGATAACAGCCAACAAGCTGTCAGTGCTTGCCATGCTCTAAAAGAGGAGCTAGAATCCCGCAATTTGTTCTTCTGCTATATACCCTGCGCTGCTCATGCCTTGTACCAGATCATAGAGGACTGCCTGAGGAGCCCAAAGCCAATACTTTCCAAGATCCGTGAATTTGCACTCGAGTTGAACACGGCGCCGATAATTGCTCAAGATTTCAAACAATTGGCTACAATCTATCAAGAAGGTTTTTGGAGATTCCCTCTTGATGCTTCAGCTACATGGAACGGAAGTTACACCCTGCTCGACCTCGTACGAAAGGCATCAAATTCAATGGACAGCACTATTAAGAAGCATGAAGAAATTTTTGGGGGTCGGAATCTGTTGCTGAATGCCACAGAGAAATCCGTCGTTAACATCTTGCATTCATTCACCGAACCATTTCACAAAATCACCTCGAATCTAAGCACCTGCAAGCTGTCCACAGTCGGCATCGTCCTCTTCTTTATGGACCACATATTAGAACTAATCAGCACATGCAGAGACACTTGCCGCCATGACTGGCTGAAGAGCATTGCAGATGATATGGCGAAGCGAGGTCGAGGTTTCGGCTCCCAGGGATACAATCTCTTCACGTACATGGCTGCAGTTCTTGATCCAAGAATAAAGAAGGAACTTATACCCGAGAAGCTCAACTCTGAGAAGAACTTGGAGGAAGCCAGGAATCACTTCACAACTCATTATACAAGCTGTCAGTTCCCTTCTGCAGCCAACGGTTTCGTGTCTCATGAACATGAGGAGGCCAATGCCGTTTCTTTTGCCGAGGAAATTGCTCGAAAACGGCGGCGGGTGAGTATGAACACGGCCACTGATGAACTGTCTCAATATCTATCGGAGCCTCTCGCTCCTATAACAATGGACGTTTTAGAATGGTGGAAGGCGAATTGTTCGAGATACCCGCGCCTTTCTGTCATGGCTAGAGACTATATGGCTGTGCAGGGAACCTCGGTGGATCCTGATGAGTTGTTTTCGAGTAAAGGTGATGGGATTCAGAAGCGGCGGTTTTGCTTGCCTTACGATAGCATGCGGGCAGTACTGTGTGTCAATTCATGGTGTCAGAGTGGCTTCAAGTTCAAGTTCAGATCATCTGAAATGAACTTTGAGAGGCATGAAAAAAACAAATGGGTTGGATCTGAGAAGGATATGTCTTGAGCGAAATTGGATGTAAACTAGCGCTTTGTAACACATTATTAGATGGGTTTCTCATTTTGTGAAACTCATACTTTTGTGTTTTGAGAGATTATGCAGTGAGAATAGATTTGTACTATTTTCTTCTCTTTAACTGAAAGAACAGAACCACTTTATCCAAGTAGGACAAATTAGAGCCGAACAAGGGATTTTCATTAAGCTTGAAAAAGTCGTCAGATTTTGTTCCTCCATTGTTCTGCTCCAGTGAATATGGGATTTTTATGGGTTTTCTTTGCAGATTTTGGAACCTTTTTCTTTCCAATTTTTTGGATGTGCTAAAATTTAATTTGCTTAATGTGGTCTTTTGTTATTAAAACATGGTTGGAGATATTTTAATTTTTTTTGTGTGACAAA

Network for GWHGAAEX006239

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.860
SRP064423	SRR2545915	Juvenile tuber	15.120
SRP108465	SRR5643513	five period of Gastrodia elata	11.220
	SRR5643514	five period of Gastrodia elata	7.690
	SRR5643515	five period of Gastrodia elata	7.470
	SRR5643524	five period of Gastrodia elata	8.300
	SRR5643525	five period of Gastrodia elata	12.080
	SRR5643528	five period of Gastrodia elata	11.270
	SRR5643658	five period of Gastrodia elata	14.070
	SRR5643659	five period of Gastrodia elata	8.510
	SRR5643660	five period of Gastrodia elata	9.250
	SRR5643661	five period of Gastrodia elata	7.710
	SRR5643662	five period of Gastrodia elata	7.680
	SRR5643663	five period of Gastrodia elata	9.070
	SRR5643664	five period of Gastrodia elata	9.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.920
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.930
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.620
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.620
SRP279888	Gastro	Gastrodia elata tuber	7.62
	Juven	Juvenile tuber	12.38
	Mother_Gastro	Mother tuber of Gastrodia elata	10.14
	Mother_Juven	Mother tuber of Juvenile	10.21