Detail information of GWHGAAEX006258/evm.TU.scaffold_179.51
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3366 | 3.00E-19 | Mitochondrial F1F0-ATP synthase, subunit d/ATP7 |
| nr | gi|326500102|dbj|BAJ90886.1| | 1.11E-23 | predicted protein [Hordeum vulgare subsp. vulgare] |
| Swissprot | tr|Q9FT52|ATP5H_ARATH | 1.00E-19 | ATP synthase subunit d, mitochondrial |
| trEMBL | tr|M0VBA1|M0VBA1_HORVD | 4.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_21708.1} |
| TAIR | AT3G52300 | 3.00E-19 | ATP synthase D chain, mitochondrial |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000174 | 1146465 | 1147578 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006258
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02138 | ATPeF0D, ATP5H, ATP7 | Metabolic pathways | map01100 |
| Oxidative phosphorylation | map00190 | ||
| Thermogenesis | map04714 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015986 | Biological Process | ATP synthesis coupled proton transport |
| GO:0015078 | Molecular Function | hydrogen ion transmembrane transporter activity |
| GO:0000276 | Cellular Component | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.480 |
| SRR2545915 | Juvenile tuber | 6.720 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.510 |
| SRR5643514 | five period of Gastrodia elata | 8.920 | |
| SRR5643515 | five period of Gastrodia elata | 9.820 | |
| SRR5643524 | five period of Gastrodia elata | 9.200 | |
| SRR5643525 | five period of Gastrodia elata | 16.860 | |
| SRR5643528 | five period of Gastrodia elata | 12.900 | |
| SRR5643658 | five period of Gastrodia elata | 26.730 | |
| SRR5643659 | five period of Gastrodia elata | 10.860 | |
| SRR5643660 | five period of Gastrodia elata | 9.550 | |
| SRR5643661 | five period of Gastrodia elata | 16.430 | |
| SRR5643662 | five period of Gastrodia elata | 12.400 | |
| SRR5643663 | five period of Gastrodia elata | 11.060 | |
| SRR5643664 | five period of Gastrodia elata | 14.200 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.960 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.430 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.010 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.490 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.700 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.22 |
| Juven | Juvenile tuber | 2.55 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.87 | |
| Mother_Juven | Mother tuber of Juvenile | 4.67 |