Detail information of GWHGAAEX006269/evm.TU.scaffold_179.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|294012667|ref|YP_003546127.1|1.00E-18F-type H+-transporting ATPase oligomycin sensitivity conferral protein [Sphingobium japonicum UT26S]
KOGKOG16621.00E-71Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5
nrgi|743851019|ref|XP_010940031.1|1.05E-112PREDICTED: ATP synthase subunit O, mitochondrial-like [Elaeis guineensis]
Swissprottr|P22778|ATPO_IPOBA2.00E-89ATP synthase subunit O, mitochondrial (Precursor)
trEMBLtr|M0SGE8|M0SGE8_MUSAM2.00E-103Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P20820_001}
TAIRAT5G134501.00E-71delta subunit of Mt ATP synthase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017413086861321658-
Transcript Sequence

Network for GWHGAAEX006269

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00213.17OSCP1112804.00E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02137ATPeF0O, ATP5O, ATP5 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986Biological ProcessATP synthesis coupled proton transport
GO:0046933Molecular Functionproton-transporting ATP synthase activity, rotational mechanism

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms88.010
SRR2545915Juvenile tuber101.380
SRP108465SRR5643513five period of Gastrodia elata118.780
SRR5643514five period of Gastrodia elata152.520
SRR5643515five period of Gastrodia elata119.660
SRR5643524five period of Gastrodia elata145.170
SRR5643525five period of Gastrodia elata83.370
SRR5643528five period of Gastrodia elata92.670
SRR5643658five period of Gastrodia elata73.140
SRR5643659five period of Gastrodia elata83.930
SRR5643660five period of Gastrodia elata78.370
SRR5643661five period of Gastrodia elata75.120
SRR5643662five period of Gastrodia elata76.610
SRR5643663five period of Gastrodia elata79.790
SRR5643664five period of Gastrodia elata79.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.520
SRR6049655Rhizomagastrodiae_C368-T10_good_1133.920
SRR6049656Rhizomagastrodiae_C368-T07_good_1109.500
SRR6049657Rhizomagastrodiae_C368-T07_good_185.050
SRR6049658Rhizomagastrodiae_C368-T04_good_188.650
SRR6049659Rhizomagastrodiae_C368-T04_good_190.500
SRR6049660Rhizomagastrodiae_C368-T01_good_182.890
SRR6049661Rhizomagastrodiae_C368-T04_good_187.980
SRR6049662Rhizomagastrodiae_C368-T01_good_1119.820
SRR6049663Rhizomagastrodiae_C368-T01_good_193.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1135.270
SRR6049665Rhizomagastrodiae_C368-T10_good_1135.270
SRP279888GastroGastrodia elata tuber 117.41
JuvenJuvenile tuber117.87
Mother_GastroMother tuber of Gastrodia elata 95.31
Mother_JuvenMother tuber of Juvenile 108.19