Detail information of GWHGAAEX006283/evm.TU.scaffold_18.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26382.00E-28UDP-glucose pyrophosphorylase
nrgi|566082307|gb|AHC54718.1|4.19E-27pyrophosphorylase [Dendrobium catenatum]
Swissprottr|P57751|UGPA1_ARATH7.00E-29UTP--glucose-1-phosphate uridylyltransferase 1
trEMBLtr|V9SCZ1|V9SCZ1_9ASPA2.00E-27Pyrophosphorylase {ECO:0000313|EMBL:AHC54718.1}
TAIRAT5G173102.00E-28UDP-glucose pyrophosphorylase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000015354245371024-
Transcript Sequence

Network for GWHGAAEX006283

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01704.17UDPGP751503.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00963UGP2, galU, galF Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Pentose and glucuronate interconversionsmap00040
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0070569Molecular Functionuridylyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.490
SRR2545915Juvenile tuber1.680
SRP108465SRR5643513five period of Gastrodia elata1.920
SRR5643514five period of Gastrodia elata2.900
SRR5643515five period of Gastrodia elata2.480
SRR5643524five period of Gastrodia elata1.700
SRR5643525five period of Gastrodia elata3.490
SRR5643528five period of Gastrodia elata2.400
SRR5643658five period of Gastrodia elata5.430
SRR5643659five period of Gastrodia elata3.240
SRR5643660five period of Gastrodia elata3.550
SRR5643661five period of Gastrodia elata3.340
SRR5643662five period of Gastrodia elata4.250
SRR5643663five period of Gastrodia elata3.420
SRR5643664five period of Gastrodia elata3.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.950
SRR6049655Rhizomagastrodiae_C368-T10_good_11.600
SRR6049656Rhizomagastrodiae_C368-T07_good_12.090
SRR6049657Rhizomagastrodiae_C368-T07_good_12.420
SRR6049658Rhizomagastrodiae_C368-T04_good_11.330
SRR6049659Rhizomagastrodiae_C368-T04_good_10.160
SRR6049660Rhizomagastrodiae_C368-T01_good_11.400
SRR6049661Rhizomagastrodiae_C368-T04_good_10.720
SRR6049662Rhizomagastrodiae_C368-T01_good_12.690
SRR6049663Rhizomagastrodiae_C368-T01_good_12.330
SRR6049664Rhizomagastrodiae_C368-T10_good_11.940
SRR6049665Rhizomagastrodiae_C368-T10_good_11.940
SRP279888GastroGastrodia elata tuber 0.87
JuvenJuvenile tuber1.72
Mother_GastroMother tuber of Gastrodia elata 0.85
Mother_JuvenMother tuber of Juvenile 1.12