Detail information of GWHGAAEX006286/evm.TU.scaffold_18.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG09261.00E-15DEAH-box RNA helicase
nrgi|743784169|ref|XP_010921592.1|6.59E-30PREDICTED: probable ATP-dependent RNA helicase DHX37 [Elaeis guineensis]
trEMBLtr|M0XIV5|M0XIV5_HORVD6.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_60452.3}
TAIRAT1G333901.00E-15RNA helicase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000015495533495907-
Transcript Sequence

Network for GWHGAAEX006286

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.150
SRR2545915Juvenile tuber0.810
SRP108465SRR5643513five period of Gastrodia elata8.260
SRR5643514five period of Gastrodia elata4.980
SRR5643515five period of Gastrodia elata2.970
SRR5643524five period of Gastrodia elata2.540
SRR5643525five period of Gastrodia elata4.080
SRR5643528five period of Gastrodia elata6.150
SRR5643658five period of Gastrodia elata4.660
SRR5643659five period of Gastrodia elata13.430
SRR5643660five period of Gastrodia elata17.960
SRR5643661five period of Gastrodia elata11.410
SRR5643662five period of Gastrodia elata15.280
SRR5643663five period of Gastrodia elata13.020
SRR5643664five period of Gastrodia elata12.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.780
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_115.360
SRR6049657Rhizomagastrodiae_C368-T07_good_118.690
SRR6049658Rhizomagastrodiae_C368-T04_good_119.480
SRR6049659Rhizomagastrodiae_C368-T04_good_118.750
SRR6049660Rhizomagastrodiae_C368-T01_good_110.320
SRR6049661Rhizomagastrodiae_C368-T04_good_113.190
SRR6049662Rhizomagastrodiae_C368-T01_good_15.400
SRR6049663Rhizomagastrodiae_C368-T01_good_112.600
SRR6049664Rhizomagastrodiae_C368-T10_good_12.010
SRR6049665Rhizomagastrodiae_C368-T10_good_12.010
SRP279888GastroGastrodia elata tuber 9.18
JuvenJuvenile tuber13.82
Mother_GastroMother tuber of Gastrodia elata 14.51
Mother_JuvenMother tuber of Juvenile 23.50