Detail information of GWHGAAEX006289/evm.TU.scaffold_18.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|89900890|ref|YP_523361.1|5.00E-36ATP-dependent helicase HrpA [Albidiferax ferrireducens T118]
KOGKOG09261.00E-64DEAH-box RNA helicase
nrgi|743784169|ref|XP_010921592.1|1.54E-72PREDICTED: probable ATP-dependent RNA helicase DHX37 [Elaeis guineensis]
Swissprottr|Q38953|DHX8_ARATH1.00E-36Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
trEMBLtr|M0UEQ2|M0UEQ2_HORVD1.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_10268.2, ECO:0000313|EnsemblPlants:MLOC_10268.3}
TAIRAT1G333901.00E-64RNA helicase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000015497773507604-
Transcript Sequence

Network for GWHGAAEX006289

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13401.5AAA_22131312.30E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.620
SRR2545915Juvenile tuber32.330
SRP108465SRR5643513five period of Gastrodia elata15.490
SRR5643514five period of Gastrodia elata16.190
SRR5643515five period of Gastrodia elata16.130
SRR5643524five period of Gastrodia elata17.270
SRR5643525five period of Gastrodia elata14.200
SRR5643528five period of Gastrodia elata16.500
SRR5643658five period of Gastrodia elata20.300
SRR5643659five period of Gastrodia elata23.270
SRR5643660five period of Gastrodia elata24.470
SRR5643661five period of Gastrodia elata22.620
SRR5643662five period of Gastrodia elata20.480
SRR5643663five period of Gastrodia elata23.140
SRR5643664five period of Gastrodia elata25.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.740
SRR6049655Rhizomagastrodiae_C368-T10_good_19.250
SRR6049656Rhizomagastrodiae_C368-T07_good_125.720
SRR6049657Rhizomagastrodiae_C368-T07_good_121.400
SRR6049658Rhizomagastrodiae_C368-T04_good_123.720
SRR6049659Rhizomagastrodiae_C368-T04_good_130.480
SRR6049660Rhizomagastrodiae_C368-T01_good_130.750
SRR6049661Rhizomagastrodiae_C368-T04_good_131.050
SRR6049662Rhizomagastrodiae_C368-T01_good_114.740
SRR6049663Rhizomagastrodiae_C368-T01_good_118.850
SRR6049664Rhizomagastrodiae_C368-T10_good_123.980
SRR6049665Rhizomagastrodiae_C368-T10_good_123.980
SRP279888GastroGastrodia elata tuber 30.22
JuvenJuvenile tuber26.20
Mother_GastroMother tuber of Gastrodia elata 13.18
Mother_JuvenMother tuber of Juvenile 29.02