Detail information of GWHGAAEX006290/evm.TU.scaffold_18.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|124027704|ref|YP_001013024.1|4.00E-06single-stranded DNA-binding protein [Hyperthermus butylicus DSM 5456]
KOGKOG34167.00E-59Predicted nucleic acid binding protein
nrgi|672199813|ref|XP_008777712.1|2.68E-71PREDICTED: SOSS complex subunit B homolog isoform X1 [Phoenix dactylifera]
trEMBLtr|M0SUF4|M0SUF4_MUSAM6.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P00250_001}
TAIRAT5G636907.00E-59Nucleic acid-binding, OB-fold-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000015514751518245-
Transcript Sequence

Network for GWHGAAEX006290

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.570
SRR2545915Juvenile tuber0.350
SRP108465SRR5643513five period of Gastrodia elata8.720
SRR5643514five period of Gastrodia elata3.950
SRR5643515five period of Gastrodia elata5.680
SRR5643524five period of Gastrodia elata3.420
SRR5643525five period of Gastrodia elata8.740
SRR5643528five period of Gastrodia elata12.580
SRR5643658five period of Gastrodia elata10.290
SRR5643659five period of Gastrodia elata12.420
SRR5643660five period of Gastrodia elata15.680
SRR5643661five period of Gastrodia elata12.570
SRR5643662five period of Gastrodia elata15.850
SRR5643663five period of Gastrodia elata12.690
SRR5643664five period of Gastrodia elata23.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.640
SRR6049655Rhizomagastrodiae_C368-T10_good_119.350
SRR6049656Rhizomagastrodiae_C368-T07_good_17.050
SRR6049657Rhizomagastrodiae_C368-T07_good_110.460
SRR6049658Rhizomagastrodiae_C368-T04_good_19.610
SRR6049659Rhizomagastrodiae_C368-T04_good_112.430
SRR6049660Rhizomagastrodiae_C368-T01_good_111.390
SRR6049661Rhizomagastrodiae_C368-T04_good_111.390
SRR6049662Rhizomagastrodiae_C368-T01_good_17.140
SRR6049663Rhizomagastrodiae_C368-T01_good_17.530
SRR6049664Rhizomagastrodiae_C368-T10_good_17.800
SRR6049665Rhizomagastrodiae_C368-T10_good_17.800
SRP279888GastroGastrodia elata tuber 8.20
JuvenJuvenile tuber9.30
Mother_GastroMother tuber of Gastrodia elata 5.64
Mother_JuvenMother tuber of Juvenile 6.03