Detail information of GWHGAAEX006296/evm.TU.scaffold_18.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672189767|ref|XP_008775069.1|1.49E-30PREDICTED: UPF0503 protein At3g09070, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9SS80|U503A_ARATH9.00E-16UPF0503 protein At3g09070, chloroplastic (Precursor)
trEMBLtr|A0A072U007|A0A072U007_MEDTR1.00E-30DUF740 family protein {ECO:0000313|EMBL:KEH23119.1}
TAIRAT2G380701.00E-18Protein of unknown function (DUF740)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001511127631118958+
Transcript Sequence

Network for GWHGAAEX006296

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05340.11DUF74011071.60E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.660
SRR2545915Juvenile tuber3.590
SRP108465SRR5643513five period of Gastrodia elata14.490
SRR5643514five period of Gastrodia elata11.530
SRR5643515five period of Gastrodia elata12.690
SRR5643524five period of Gastrodia elata13.390
SRR5643525five period of Gastrodia elata10.880
SRR5643528five period of Gastrodia elata4.780
SRR5643658five period of Gastrodia elata5.990
SRR5643659five period of Gastrodia elata10.410
SRR5643660five period of Gastrodia elata10.500
SRR5643661five period of Gastrodia elata10.040
SRR5643662five period of Gastrodia elata8.830
SRR5643663five period of Gastrodia elata9.990
SRR5643664five period of Gastrodia elata8.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.170
SRR6049655Rhizomagastrodiae_C368-T10_good_111.860
SRR6049656Rhizomagastrodiae_C368-T07_good_18.880
SRR6049657Rhizomagastrodiae_C368-T07_good_18.370
SRR6049658Rhizomagastrodiae_C368-T04_good_13.330
SRR6049659Rhizomagastrodiae_C368-T04_good_13.050
SRR6049660Rhizomagastrodiae_C368-T01_good_14.270
SRR6049661Rhizomagastrodiae_C368-T04_good_13.220
SRR6049662Rhizomagastrodiae_C368-T01_good_15.080
SRR6049663Rhizomagastrodiae_C368-T01_good_12.850
SRR6049664Rhizomagastrodiae_C368-T10_good_17.020
SRR6049665Rhizomagastrodiae_C368-T10_good_17.020
SRP279888GastroGastrodia elata tuber 11.38
JuvenJuvenile tuber11.01
Mother_GastroMother tuber of Gastrodia elata 8.01
Mother_JuvenMother tuber of Juvenile 4.97