Gene detail

Detail information of GWHGAAEX006302/evm.TU.scaffold_18.33

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|150392463\|ref\|YP_001322512.1\|	3.00E-08	diacylglycerol kinase catalytic subunit [Alkaliphilus metalliredigens QYMF]
KOG	KOG1115	4.00E-166	Ceramide kinase
nr	gi\|672144476\|ref\|XP_008796138.1\|	0	PREDICTED: ceramide kinase [Phoenix dactylifera]
Swissprot	tr\|C0LT23\|CERK_ORYSJ	0	Ceramide kinase
trEMBL	tr\|M0RPE8\|M0RPE8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P04680_001}
TAIR	AT5G51290	4.00E-166	Diacylglycerol kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000015	1270049	1323553	+

Transcript Sequence
>GWHTAAEX006302 GGGAGGGTGAAAAGGCCAAAAATTTTCCTCCTGCGCTCAACCATGGACATTAACGCTTCTCTGAGTTCGACTCTTTTTCTAGATCGCATCGGAGACGTTACTCTCACTCTTAACCCTCATGGATTATCATGGAATCCTGTTTACACAGATCCAATCGCATCTACTTGCTGTGAGATTATGTTTCATTCTGAGACTGAAACTGAAATCAGATTTTCAGATGTTTATGCTACCGAATTAATTGGATATGGATTAATCAGTGATCACAGCAGCAGCCAAGGATATATTGTTTTGAGTAATAGTACCAAGATGCATCGATTTGCGGTACATAGTTTTCAAAAGGGCAAGAATAACACATCTCCTTTTGTTCTTTCTTCTCTCATTTTTGGACACAAGGATTTACAGGCTTGCCAAACATGGTTTGATCAAATAACTGCTTACATTAAAATGCAAGCTGGTAGGCCGAAGAATCTCTGGGTTTTTGTTCATCCACAGTGTGGGAAAGGAAATGGCCGTAAAACTTGGGAAGCAGTTGCTCCTCTTTTTTCACGAGCGCAAGTATCTACAAAGGTAACCGTGACTCAAAGGCCAGGGCATGCATATGATATACTGAAATCTTCAACAGACAGGGAGCTTAGGTCCTTTGATGGCATTATTACTGTGGGAGGTGATGGACTATTCAATGAAGCTCTTAATGGGCTTCTGTCTTCCAGGCATAAAGCTCCTTATCCTCCAGCTCCTACAATGAGTTATTCGACAGATGCCAATGATCAGGTTCAGCATCATGCTTGTGAGGATTTCAAAAATGCCAGAAAAATTTCTGACAGCCGTAGTGACATTTTCTTGGAAACTGCATGCAACAGTGATGATCGTGCGCCTCTTCTCTCAGCTTCAGAATACCCTGGATTGGCAACATGTGAACAAGAATCATGTTACGAGGATCAGGACACTGATGTACGCTTCCCCAACGATTGGCTTAGAATTGGAATCATTCCTGCAGGTTCAACTGATGCCATTGTCATCAGCACTACCGGCATGCGGGATCCCATAACATCTGCATTACACATTATCTTTGGAAGAAAAATCTGTTTGGATGTAGCTCAAGTGGTCAGATGGAAAACCACTCCATCTTCAACAGACACACCTTCAGTACGTTATGCTGCTTCTTTTGCTGGATACGGATTTTATGGAGATGTTATCAGAGAAAGTGAAAAGTATCGTTGGATGGGTCCTTCCCGCTATGATTTTACAGGAACAAAAGTGTTCTTGGAGCATAGAGTTTATGAAGCTGATATTGGTTTCTTAGAAGCTAAAACAGTTGATGTATTCAATGAAACACAAGTGATTGAGACACCCCAAGAGTTATCTTCTAGAAGGAACCCTAATAAAAGAATATGTTGTGTTAACTGCACCGTCTGTAATGAGGAAACAAATTCATCTAATGGAAGCATTAGAAGCTCTGATGGTCATGCAGAAACTGAGGATTTGAGGTGGAAAAGAAAGAATGGGCGTTTCCTTAGTATTGGTGCAGCTGTTATATCATGTCGTAATGAGCGGGCGCCTGATGGTTTAGTTGTGGATGCACATCTTTCTGATGGTTTTCTTCATCTTATATTAGTCAAAGATTGCCCCCGGCCCTTTTATTTGTGGCACTTAACAAAGCTAACCAGGAGGGGTTCTAATCCACTGGATTTTAGTTTTGTGGAGCACTATAAAACGCATGCGTTCACCTTTGCTGCAAATCATGACGAAAGTGTTTGGAATTTGGACGGAGAACTATTTCAAGCCTGCCAGGTCACAGTAAGGGCATGCCGAGGCCTTGTTAATTTATTTGCTTCTGGTCCAGAAGTTTAATTTATGCTAGCTTCTTGCATTCCCAAAATGGCTGTTATTATATTTAGATACATAAAAGGGTTTCTTGCATACAATTTATTTGCTTTTTGCTTTATAAGAACTAATGGTTTTTGACAAGAAATAGAGCTTTTCAGGCAGCAGTTTTTATACGTTCTTTGGCCACAGTTGTCTTGTACTCGAGACTATCTTATAATTTTCAAATATTATTTGAACTATACGTTTGTTTTGATATACTGGTGTGGCTTTCGACTGTCCTGCTTTAGTTCAGTAAAAACACTGTTTATTGACATGTGTTGTAATAATTTTTAAGGAACTTTGTACTTTGCCTATCATCAAAAGTGCA

Network for GWHGAAEX006302

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00781.23	DAGK_cat	143	225	4.60E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04715	CERK	Sphingolipid metabolism	map00600

Gene Ontology

GO term	Ontology	Name
GO:0003951	Molecular Function	NAD+ kinase activity
GO:0016301	Molecular Function	kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	88.360
SRP064423	SRR2545915	Juvenile tuber	44.590
SRP108465	SRR5643513	five period of Gastrodia elata	17.010
	SRR5643514	five period of Gastrodia elata	11.730
	SRR5643515	five period of Gastrodia elata	11.360
	SRR5643524	five period of Gastrodia elata	11.920
	SRR5643525	five period of Gastrodia elata	19.740
	SRR5643528	five period of Gastrodia elata	18.300
	SRR5643658	five period of Gastrodia elata	21.510
	SRR5643659	five period of Gastrodia elata	12.570
	SRR5643660	five period of Gastrodia elata	15.620
	SRR5643661	five period of Gastrodia elata	13.150
	SRR5643662	five period of Gastrodia elata	10.730
	SRR5643663	five period of Gastrodia elata	13.970
	SRR5643664	five period of Gastrodia elata	13.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	41.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	46.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	30.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	33.010
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.050
SRP279888	Gastro	Gastrodia elata tuber	19.50
	Juven	Juvenile tuber	33.25
	Mother_Gastro	Mother tuber of Gastrodia elata	24.94
	Mother_Juven	Mother tuber of Juvenile	35.76