Detail information of GWHGAAEX006307/CADD00513.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|336172688|ref|YP_004579826.1|1.00E-12hypothetical protein [Lacinutrix sp. 5H-3-7-4]
nrgi|672119636|ref|XP_008783060.1|4.00E-63PREDICTED: protein NSP-INTERACTING KINASE 1-like [Phoenix dactylifera]
Swissprottr|Q9LFS4|NIK1_ARATH1.00E-56Protein NSP-INTERACTING KINASE 1 (Precursor)
trEMBLtr|I1KWN4|I1KWN4_SOYBN8.00E-60Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G28380.1}
TAIRAT5G160004.00E-56NSP-interacting kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001518531701853828-
Transcript Sequence

Network for GWHGAAEX006307

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.11LRRNT_227652.60E-15
PF00560.32LRR_11161350.047
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.480
SRR2545915Juvenile tuber1.000
SRP108465SRR5643513five period of Gastrodia elata9.050
SRR5643514five period of Gastrodia elata6.390
SRR5643515five period of Gastrodia elata7.040
SRR5643524five period of Gastrodia elata6.360
SRR5643525five period of Gastrodia elata44.750
SRR5643528five period of Gastrodia elata12.990
SRR5643658five period of Gastrodia elata39.590
SRR5643659five period of Gastrodia elata5.770
SRR5643660five period of Gastrodia elata4.180
SRR5643661five period of Gastrodia elata3.550
SRR5643662five period of Gastrodia elata10.280
SRR5643663five period of Gastrodia elata5.640
SRR5643664five period of Gastrodia elata7.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.250
SRR6049655Rhizomagastrodiae_C368-T10_good_15.750
SRR6049656Rhizomagastrodiae_C368-T07_good_16.690
SRR6049657Rhizomagastrodiae_C368-T07_good_15.330
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_11.010
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.930
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_17.330
SRR6049665Rhizomagastrodiae_C368-T10_good_17.330
SRP279888GastroGastrodia elata tuber 6.93
JuvenJuvenile tuber14.23
Mother_GastroMother tuber of Gastrodia elata 1.44
Mother_JuvenMother tuber of Juvenile 0.63