Detail information of GWHGAAEX006330/evm.TU.scaffold_18.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392382043|ref|YP_005031240.1|3.00E-31putative aminomethyltransferase [Azospirillum brasilense Sp245]
KOGKOG29291.00E-96Transcription factor, component of CCR4 transcriptional complex
nrgi|672135327|ref|XP_008791334.1|1.66E-150PREDICTED: putative transferase CAF17 homolog, mitochondrial isoform X1 [Phoenix dactylifera]
trEMBLtr|M0U231|M0U231_MUSAM1.00E-150Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P20720_001}
TAIRAT4G121301.00E-96Glycine cleavage T-protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001535563093585227-
Transcript Sequence

Network for GWHGAAEX006330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08669.10GCV_T_C3213803.90E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.610
SRR2545915Juvenile tuber12.330
SRP108465SRR5643513five period of Gastrodia elata17.120
SRR5643514five period of Gastrodia elata16.600
SRR5643515five period of Gastrodia elata16.490
SRR5643524five period of Gastrodia elata16.770
SRR5643525five period of Gastrodia elata9.270
SRR5643528five period of Gastrodia elata8.630
SRR5643658five period of Gastrodia elata8.740
SRR5643659five period of Gastrodia elata10.880
SRR5643660five period of Gastrodia elata9.290
SRR5643661five period of Gastrodia elata11.080
SRR5643662five period of Gastrodia elata12.050
SRR5643663five period of Gastrodia elata12.710
SRR5643664five period of Gastrodia elata9.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.740
SRR6049655Rhizomagastrodiae_C368-T10_good_124.610
SRR6049656Rhizomagastrodiae_C368-T07_good_116.750
SRR6049657Rhizomagastrodiae_C368-T07_good_114.430
SRR6049658Rhizomagastrodiae_C368-T04_good_112.360
SRR6049659Rhizomagastrodiae_C368-T04_good_113.860
SRR6049660Rhizomagastrodiae_C368-T01_good_114.440
SRR6049661Rhizomagastrodiae_C368-T04_good_113.120
SRR6049662Rhizomagastrodiae_C368-T01_good_116.730
SRR6049663Rhizomagastrodiae_C368-T01_good_114.090
SRR6049664Rhizomagastrodiae_C368-T10_good_118.460
SRR6049665Rhizomagastrodiae_C368-T10_good_118.460
SRP279888GastroGastrodia elata tuber 12.01
JuvenJuvenile tuber17.56
Mother_GastroMother tuber of Gastrodia elata 10.33
Mother_JuvenMother tuber of Juvenile 11.90