Gene detail

Detail information of GWHGAAEX006331/evm.TU.scaffold_18.76

Functional Annotation

Database	Orthologs	Annotation
COG	gi\|389878529\|ref\|YP_006372094.1\|	dehydrogenase [Tistrella mobilis KA081020-065]
KOG	KOG2415	Electron transfer flavoprotein ubiquinone oxidoreductase
nr	gi\|743828103\|ref\|XP_010933769.1\|	PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q337B8\|ETFQO_ORYSJ	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (Precursor)
trEMBL	tr\|M5XQI5\|M5XQI5_PRUPE	Uncharacterized protein {ECO:0000313\|EMBL:EMJ28164.1}
TAIR	AT2G43400	electron-transfer flavoprotein:ubiquinone oxidoreductase

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000015	3660338	3732745	+

Transcript Sequence
>GWHTAAEX006331 GCCTGAGCCAATCTTTGAATTTCCATAAAAATTGAAAAAAATCAACAAGTAGGTGTTAGTTCCATCTTCTGCGTTTCCAGTAGGTCCAGTAGGTCTTCCCCAAATTTCTTTACTTGTGTCGTCGTTAGTCCTTTAGATTCTTTCTGTAGTCGTTAGTGCCTGGATCCCAGCAGTGTCAGCAGCTATGTATCGATTATTTTCCAGATCGAATTTCTTCGTAAAACCAATCATTAAACCTCCTCCCCCAATCCCTCCTCATATATCAAGTGCCTCTTCTCCTGTTTACGCCACTCTGATCAGTCCGAAACCCGTATTGCTATTTAACTTCTCTTTCGACTATTCGAAATTGCGAAATTCAATTTCCGGCTCTCAGGTGGGCCAATGGAGGGCGTTTTGTAGCAATTCGAGCAGGCGGGAGTCTATGCAATACGATATTGTTATAGTTGGAGCTGGGCCTGCGGGGCTGTCGGCAGCCATACGGTTGAAGCAGCTGTGTTTAGAAAGGAACAAGGAAATGTCAGTCTGTGTCGTGGAGAAAGGCTCAGAAGTGGGTGCACACATAATTTCGGGGAATGTTTTTGAGCCTCGTGCATTGAATGAACTTATACCAAATTGGAGACAAGAAGGGGCTCCAATTGAAGTTCCAGTGTCTTCTGACAAATTTTGGCTGCTAACGGAGAATAATCATTTCCCGCTGCCATCTCCCTATAATAATGATGGAAACTATATAATCAGCTTGAGCCAGCTTGCTCGATGGATGGCAACAAAAGCTGAAGAATTAGGTGTAGAAGTTTATCCTGGTTTTGCCGCTAGTGAGATTCTATATGATGAAAATGAAAGGGTTGTTGGGATTGGAACTAATGACATGGGCATTGCCAAGGATGGATCAAAAAAGGAAACTTTTCAGAGTGGCGTTGAGCTGAAAGGGAGGCTTACATTTCTTGCTGAAGGTTGTAGAGGTTCATTATCAGAGAAATTAATAAGGAAATATAAACTTCGTGAAAAGGCACAAGGACATCATCAAACATATGCATTAGGCATTAAAGAGGTTTGGGAGATTGAAGAAGAAAAACATGAGCCTGGCGCTGTGTTGCATACTATTGGATGGCCCTTAGATAGGAAAACGTATGGTGGAACGTTCTTGTACCACATGAAAGATAGACAGGTATCAATCGGTTTAGTTGTTGCTTTAAACTACCGCAATCCCTACTTGAGCCCTTTTGATGAATTTCAGAAATTCAAGCATCACCCTTCAATCAAATCTCTTTTGGAAAGAGGAACTATTCTTCAATATGGTGCCCGCACTCTAAATGAAGGCGGTTTTCAGTCAATTCCATATCCTGTGTTTCCCGGAGGAGTTATTATTGGTTGCTCTGCAGGCTTCATGAACGTGCCTAAAATAAAGGGTACACATACAGCCATGAAATCAGGAATGCTGGCAGCAGAAGCTGCATTCAAGGTCCTTGTTGAAGGCTCTCAAATGGAAACGTACTGGGACTGTTTGAAGGAATCCTGGATATGGGAAGAGCTTTATCGAGTTCGAAATTATCGTCCAGCATTTGAACATGGTTTAGTGCCTGGCTTAGTCATCTCTGCATTAGAGAGGTATATTTTTAGGGGAAGCTTTCCATTGACACTAAAACATGGGAAACAAGATCATGAAGCAACAGAGATCGCAAGTCTTCACACTCCCATTCAATATCCAAAGCCAGATGGTGTATTATCTTTTGACGTGCCAACTTCACTGTACAGAAGCAACACGAATCACGTGCATGATCAGCCTGCTCATCTCAGGCTGAGGGACCTACATCTACCAAAACTTGAAAACTTGCCAAAATTTAAAGGACTGGAGTCCCGGTACTGCCCTGCCCATGTATACGAGTATGTCCCGGATGAGTCGCATGGTCAAAAACTCGAAATCAATGCCCAAAACTGCCTTCATTGTAAGGCTTGTGATATCAAAGATCCCAAACAAAACATTGAGTGGACAGTTCCTGAAGGAGGTGGTGGTCCTGGATATACAATTATGTAGACCTTTGCTACCGCATCACTGCGTTTTGAAATTGCATTTTGAATGTTCACAAGTAAGAAAGGAACAGAGAAATGGGTTGGAATACGTTTCAGTTTTTGTAGCCTCACTTAACAATGTTGTACCCGTTTCTTCATTATTTGAACCTATGAAAAATAAACAATGTTGTTAACTTTATAGCTTTCCGTGTTGTAGGACAGCATGTGTTGTGTATTTATTATGTTAATATTGTTTGACCGGAAGTGACACGCTACATTGCGTGAATATAGTGAAAAGTGTGCAAGGGCCGTTACATCGGCCCCCAAATGTGATGTTAATTAAGCAAGGATTCTTATATTATGGATGGATGCTGGTTAAGAAGTTAGTCTGTGATTTAAATTAAGATTAAATAGCTGGAATATTAACTCTTACTTGC

Network for GWHGAAEX006331

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13450.5	NAD_binding_8	86	131	2.80E-06
PF05187.12	ETF_QO	511	613	1.10E-43

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.800
SRP064423	SRR2545915	Juvenile tuber	30.100
SRP108465	SRR5643513	five period of Gastrodia elata	20.040
	SRR5643514	five period of Gastrodia elata	22.090
	SRR5643515	five period of Gastrodia elata	19.070
	SRR5643524	five period of Gastrodia elata	20.180
	SRR5643525	five period of Gastrodia elata	9.260
	SRR5643528	five period of Gastrodia elata	7.050
	SRR5643658	five period of Gastrodia elata	10.310
	SRR5643659	five period of Gastrodia elata	23.970
	SRR5643660	five period of Gastrodia elata	24.840
	SRR5643661	five period of Gastrodia elata	22.860
	SRR5643662	five period of Gastrodia elata	20.210
	SRR5643663	five period of Gastrodia elata	20.050
	SRR5643664	five period of Gastrodia elata	22.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.250
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.090
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.080
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.950
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	50.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	34.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	41.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	23.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.030
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.790
SRP279888	Gastro	Gastrodia elata tuber	27.48
	Juven	Juvenile tuber	30.94
	Mother_Gastro	Mother tuber of Gastrodia elata	23.93
	Mother_Juven	Mother tuber of Juvenile	25.50