Detail information of GWHGAAEX006345/evm.TU.scaffold_18.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16032.00E-55Copper chaperone
nrgi|672176426|ref|XP_008808288.1|2.59E-80PREDICTED: neurofilament medium polypeptide-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SZN7|HIP26_ARATH2.00E-10Heavy metal-associated isoprenylated plant protein 26 (Precursor)
trEMBLtr|M0T064|M0T064_MUSAM1.00E-79Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P20350_001}
TAIRAT5G245802.00E-55Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001573704427373173+
Transcript Sequence

Network for GWHGAAEX006345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA40942.10E-12
PF00403.25HMA1341777.90E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms98.530
SRR2545915Juvenile tuber52.920
SRP108465SRR5643513five period of Gastrodia elata73.100
SRR5643514five period of Gastrodia elata104.770
SRR5643515five period of Gastrodia elata89.320
SRR5643524five period of Gastrodia elata95.820
SRR5643525five period of Gastrodia elata162.910
SRR5643528five period of Gastrodia elata150.360
SRR5643658five period of Gastrodia elata123.320
SRR5643659five period of Gastrodia elata81.370
SRR5643660five period of Gastrodia elata76.920
SRR5643661five period of Gastrodia elata60.600
SRR5643662five period of Gastrodia elata111.460
SRR5643663five period of Gastrodia elata119.660
SRR5643664five period of Gastrodia elata164.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1155.580
SRR6049655Rhizomagastrodiae_C368-T10_good_1128.500
SRR6049656Rhizomagastrodiae_C368-T07_good_1112.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1196.880
SRR6049658Rhizomagastrodiae_C368-T04_good_1144.310
SRR6049659Rhizomagastrodiae_C368-T04_good_1154.810
SRR6049660Rhizomagastrodiae_C368-T01_good_1123.890
SRR6049661Rhizomagastrodiae_C368-T04_good_1106.470
SRR6049662Rhizomagastrodiae_C368-T01_good_171.970
SRR6049663Rhizomagastrodiae_C368-T01_good_164.750
SRR6049664Rhizomagastrodiae_C368-T10_good_166.730
SRR6049665Rhizomagastrodiae_C368-T10_good_166.730
SRP279888GastroGastrodia elata tuber 85.07
JuvenJuvenile tuber60.92
Mother_GastroMother tuber of Gastrodia elata 122.89
Mother_JuvenMother tuber of Juvenile 20.27