Gene detail

Detail information of GWHGAAEX006346/evm.TU.scaffold_18.119

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672120562\|ref\|XP_008783552.1\|	1.19E-96	PREDICTED: uncharacterized protein LOC103702771 [Phoenix dactylifera]
Swissprot	tr\|Q9FFI5\|NAC86_ARATH	4.00E-59	NAC domain-containing protein 86 {ECO:0000312\|EMBL:AED92405.1}
trEMBL	tr\|M0ST29\|M0ST29_MUSAM	8.00E-91	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P29170_001}
TAIR	AT4G35580	1.00E-70	NAC transcription factor-like 9

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000015	7449400	7456401	-

Transcript Sequence
>GWHTAAEX006346 ATGAAAAATTTATAGAGAAGTATATTGAAATAACATTTTATACTGAGGAGGCGAGTCTTTTTTCAGAAGGTTCCCTGAAGTAGCTATCAAATCTTCAGCTGATTAATTTTCATTTTCCAAGGCTTGGGAGTCCGTTCAAGCATAATTGTAGAAGAAGCTGAGGGCGTCAGCCGCTTTATCAAAGTTGGGCATACTTGCTGGATTATGGCGGGGCTGGAGGGTCTCCCCTTCGACTCACTGCCACTAGGGTTCCGCTTCCGCCCTACGGACGAGGAGCTGGTGAACCATTATCTGAAGCGTAAGATCAATGGTCGGATCAAAGCTGATGCCGTCGTGATCCCTGAGGTCGATGTCTGCAAGTGCGAACCTTGGGATCTCCCAGAGAAATCGCTGATAAGATCGGAGGATCCTGAATGGTTCTTCTTCGCCCCGAAGGATCGCAAATATCCGAACGGCCTGCGATCTAACAGGGCCACGGCAGCCGGCTACTGGAAGGCCACGGGAAAGGACAGAACTATCAAGACGCGCCCTCCGTCTTCTGTGGTCATTGGTATGAAGAAGACTTTAGTCTTCTACCGTGGCCGAGCTCCCAGGGGAGAGCGCACTTTCTGGATCATGCACGAGTATCGCACTGTGGAGCCGGACTTCGATCAGGGTAGTTTTGTGCTTTGTCGGTTGTTCAAGAAGCCTGAAGAGAAGATTTTAACTCCCAATGCAGAGGAAATGGATATCAGCGGCTTTTCTCCTGCCCCAACAGGGTCCTATCCAGATGCCCTGGTGCAAGGTCCTGATGCAACCCCACCACCCCAGGAAATTGCACTCAAATTCCATGAAGTAACACCTGCATCACATGAAACGGTTGACAAGTCCGCATCAAATTCAGATGAAACACGTAGCTATAGCAATATCACTGAAGATATTGGTGCTGGTGAAATAGATATAGATAACCTGAAGGGTGGTATTGTTCCGTTGAATTTATGCAATTTAGGCCCTGAATATGAGCAGCATGGTTCTGATCAATTTTACTACAATTCCCCGTCAGATTACTATATGAGTCACCTATCTTTTGATGATAGTGGTTTTGGTGTATCCTCCAAAGACGAAGATACTGATGGCGAGTTCGTTTCCACGTTTTTAGATGCCATTCTTGTTAAAACCGAAGAAAAATGTTCACCTGAGTTTATGATTTCAGCAAATTCCTCTGAAGTATTTCCAGCTTCTCAAGTTTACCCCATTAAACAAGAATATGCCTTGGACAATACTTCTGGGCTTGACAGTGTAATTGAGGATAATGCAGACATTGATGCTCTACTGCTACAGGAAGACCCTTGCTCGGATGTATTTTGTGAGTTTGGCGGGCCATTGAGCCCATCAAGTTACTTTATGCCTCATACACCTAGCTCATACAATGAATTTGGAGCCCACTTTGATGGCCCTTTCATTGAAAGTCTTGATTTCAATTGTTCTGTTGACTCGATTGCACATGAAGATCAATCCATGAGTTCATTTAATGTAAATGGTGTATTTGAAAGTAGCGAAGCATCAGACCATCTATTTGGAGGAACTAGTCGTCAGGATCTTATTAAAAATGAATCCGACTCCAATGAAGTGGACAATTCTGCCAGCACCGGAATAAAGATCATGGCTCGCCGTCGACCGATTTCAGCAAATCCAGATCAAGTGGGGCATCATGACATGACAGCTCATGGTGATGCTTTTAGAAGGATACGGTTGCAAACATCATTCCTTGCAGGATCAACTATCATTTCTGATGGAAAATCCAGTATCGTTAATGGAGATAATGATGGGAAAGCTGAGATGTCTGAGGCTGAAAAAAAGAATGAGTTTTGCGAATATGATGAATCAGTAACCTCAACTATTATTATAAAATTGGAATCTTTGGATTCCTCCTATAACGATGACACTGCTTCCTCTGTGCCACATACAGATGATGCTGCGTCCGCTGTAGAGATGAAGCACCCCAGTTCTGAGAGCTCTCAGACACCCAGCCCAGTGCTCAGATTAAGAAATAAAGAGCCCAGTAACCTTCATACTAAGCCAGATAGTTCTCTTTTGGTGGGACCAAAAGCTGCGCTAGTTCATTTAAGAAGAGTAACTGTGGTGATCGCAGCTATTCTTTGTGTTATGTGCATTGGAATAGGTTGGTTCTTAAACTCTCGAAGAGCAGGATATGGACATAAATTATTCAGCCTCTATTTGTAGCTTTTTTCTTGTAAATAGCAGCAACAGGTGACAAGAAGTCTTTGGGAGCTCATTTATGGGACCGTGTAAGCTTTGCAGATGGATGTCAGTTTGGATAGCTGGGGATCCTTTCAATTGGCCTTTGACAAATATGCCATTTCTCTTTATATTTGAGGGCTCTACTGTCTCCAGAGATCTAGCATATGAAGCATCAATGTTTGAACGTTAGCAGAAACTGTGTTTGTTTCAGCTCTTTGGAGCCCACTGTTCTTTGTAGAAGCAGGCTTTATCTTTTGTGAATTGCTGGAGTCACTGTTTTCTTCTTTTTTTGTGTATCTATCCTAGAAAATTTTCTTCTTATGTATTGTACATTATTCTATTATAAAAGCGGTAAATTATGTTTTGTTTATACAAACTGAGCTGAAACTTTTTGTTGCGTTAATGCCATTTAATGTCCGTTATCACCC

Network for GWHGAAEX006346

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02365.14	NAM	13	142	8.40E-35

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	44.710
SRP064423	SRR2545915	Juvenile tuber	53.140
SRP108465	SRR5643513	five period of Gastrodia elata	32.450
	SRR5643514	five period of Gastrodia elata	31.060
	SRR5643515	five period of Gastrodia elata	51.800
	SRR5643524	five period of Gastrodia elata	31.850
	SRR5643525	five period of Gastrodia elata	33.690
	SRR5643528	five period of Gastrodia elata	32.880
	SRR5643658	five period of Gastrodia elata	30.240
	SRR5643659	five period of Gastrodia elata	54.460
	SRR5643660	five period of Gastrodia elata	42.790
	SRR5643661	five period of Gastrodia elata	58.890
	SRR5643662	five period of Gastrodia elata	52.870
	SRR5643663	five period of Gastrodia elata	41.180
	SRR5643664	five period of Gastrodia elata	56.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	37.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	35.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.280
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	27.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	36.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	36.880
SRP279888	Gastro	Gastrodia elata tuber	38.72
	Juven	Juvenile tuber	55.30
	Mother_Gastro	Mother tuber of Gastrodia elata	62.18
	Mother_Juven	Mother tuber of Juvenile	105.25