Detail information of GWHGAAEX006347/evm.TU.scaffold_18.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|114570853|ref|YP_757533.1|2.00E-100alcohol dehydrogenase [Maricaulis maris MCS10]
KOGKOG00234.00E-164Alcohol dehydrogenase, class V
nrgi|695021638|ref|XP_009397914.1|3.39E-177PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9CAI3|CADH1_ARATH1.00E-164Probable cinnamyl alcohol dehydrogenase 1
trEMBLtr|M0SSA7|M0SSA7_MUSAM2.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26450_001}
TAIRAT1G726804.00E-164cinnamyl-alcohol dehydrogenase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001577298717740029-
Transcript Sequence

Network for GWHGAAEX006347

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N351502.90E-22
PF00107.25ADH_zinc_N1923132.90E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00083CAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.670
SRR2545915Juvenile tuber8.110
SRP108465SRR5643513five period of Gastrodia elata62.630
SRR5643514five period of Gastrodia elata59.700
SRR5643515five period of Gastrodia elata59.020
SRR5643524five period of Gastrodia elata63.370
SRR5643525five period of Gastrodia elata86.080
SRR5643528five period of Gastrodia elata93.050
SRR5643658five period of Gastrodia elata81.870
SRR5643659five period of Gastrodia elata42.250
SRR5643660five period of Gastrodia elata42.120
SRR5643661five period of Gastrodia elata40.740
SRR5643662five period of Gastrodia elata38.950
SRR5643663five period of Gastrodia elata41.780
SRR5643664five period of Gastrodia elata36.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.710
SRR6049655Rhizomagastrodiae_C368-T10_good_155.380
SRR6049656Rhizomagastrodiae_C368-T07_good_155.840
SRR6049657Rhizomagastrodiae_C368-T07_good_158.470
SRR6049658Rhizomagastrodiae_C368-T04_good_150.870
SRR6049659Rhizomagastrodiae_C368-T04_good_161.340
SRR6049660Rhizomagastrodiae_C368-T01_good_145.050
SRR6049661Rhizomagastrodiae_C368-T04_good_152.670
SRR6049662Rhizomagastrodiae_C368-T01_good_136.120
SRR6049663Rhizomagastrodiae_C368-T01_good_136.290
SRR6049664Rhizomagastrodiae_C368-T10_good_164.640
SRR6049665Rhizomagastrodiae_C368-T10_good_164.640
SRP279888GastroGastrodia elata tuber 44.86
JuvenJuvenile tuber70.15
Mother_GastroMother tuber of Gastrodia elata 81.39
Mother_JuvenMother tuber of Juvenile 95.90