Detail information of GWHGAAEX006352/evm.TU.scaffold_180.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47726.00E-48Predicted tRNA-splicing endonuclease subunit
nrgi|695065357|ref|XP_009421264.1|2.71E-96PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RI54|M0RI54_MUSAM1.00E-96Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P14280_001}
TAIRAT3G023706.00E-48Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001814255847784+
Transcript Sequence

Network for GWHGAAEX006352

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12928.6tRNA_int_end_N228873.70E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.700
SRR2545915Juvenile tuber20.340
SRP108465SRR5643513five period of Gastrodia elata49.470
SRR5643514five period of Gastrodia elata44.330
SRR5643515five period of Gastrodia elata45.810
SRR5643524five period of Gastrodia elata46.680
SRR5643525five period of Gastrodia elata82.370
SRR5643528five period of Gastrodia elata76.450
SRR5643658five period of Gastrodia elata74.190
SRR5643659five period of Gastrodia elata62.450
SRR5643660five period of Gastrodia elata78.110
SRR5643661five period of Gastrodia elata72.220
SRR5643662five period of Gastrodia elata71.790
SRR5643663five period of Gastrodia elata83.420
SRR5643664five period of Gastrodia elata104.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.080
SRR6049655Rhizomagastrodiae_C368-T10_good_179.550
SRR6049656Rhizomagastrodiae_C368-T07_good_132.690
SRR6049657Rhizomagastrodiae_C368-T07_good_158.550
SRR6049658Rhizomagastrodiae_C368-T04_good_17.140
SRR6049659Rhizomagastrodiae_C368-T04_good_18.030
SRR6049660Rhizomagastrodiae_C368-T01_good_122.220
SRR6049661Rhizomagastrodiae_C368-T04_good_16.390
SRR6049662Rhizomagastrodiae_C368-T01_good_115.060
SRR6049663Rhizomagastrodiae_C368-T01_good_16.640
SRR6049664Rhizomagastrodiae_C368-T10_good_127.960
SRR6049665Rhizomagastrodiae_C368-T10_good_127.960
SRP279888GastroGastrodia elata tuber 11.66
JuvenJuvenile tuber80.93
Mother_GastroMother tuber of Gastrodia elata 46.55
Mother_JuvenMother tuber of Juvenile 58.25