Detail information of GWHGAAEX006353/evm.TU.scaffold_180.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47721.00E-10Predicted tRNA-splicing endonuclease subunit
nrgi|743802833|ref|XP_010926753.1|1.13E-24PREDICTED: uncharacterized protein LOC105048946 [Elaeis guineensis]
trEMBLtr|M0RI54|M0RI54_MUSAM8.00E-23Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P14280_001}
TAIRAT3G573601.00E-10Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001815796960489+
Transcript Sequence

Network for GWHGAAEX006353

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.840
SRR2545915Juvenile tuber12.600
SRP108465SRR5643513five period of Gastrodia elata11.060
SRR5643514five period of Gastrodia elata4.270
SRR5643515five period of Gastrodia elata6.300
SRR5643524five period of Gastrodia elata4.720
SRR5643525five period of Gastrodia elata8.460
SRR5643528five period of Gastrodia elata5.690
SRR5643658five period of Gastrodia elata10.280
SRR5643659five period of Gastrodia elata7.090
SRR5643660five period of Gastrodia elata3.790
SRR5643661five period of Gastrodia elata3.410
SRR5643662five period of Gastrodia elata11.380
SRR5643663five period of Gastrodia elata6.620
SRR5643664five period of Gastrodia elata11.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.690
SRR6049655Rhizomagastrodiae_C368-T10_good_14.750
SRR6049656Rhizomagastrodiae_C368-T07_good_12.180
SRR6049657Rhizomagastrodiae_C368-T07_good_113.110
SRR6049658Rhizomagastrodiae_C368-T04_good_10.910
SRR6049659Rhizomagastrodiae_C368-T04_good_11.610
SRR6049660Rhizomagastrodiae_C368-T01_good_12.870
SRR6049661Rhizomagastrodiae_C368-T04_good_10.500
SRR6049662Rhizomagastrodiae_C368-T01_good_13.790
SRR6049663Rhizomagastrodiae_C368-T01_good_11.480
SRR6049664Rhizomagastrodiae_C368-T10_good_16.190
SRR6049665Rhizomagastrodiae_C368-T10_good_16.190
SRP279888GastroGastrodia elata tuber 1.24
JuvenJuvenile tuber10.85
Mother_GastroMother tuber of Gastrodia elata 6.72
Mother_JuvenMother tuber of Juvenile 6.45