Detail information of GWHGAAEX006366/evm.TU.scaffold_180.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42821.00E-56Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|695056561|ref|XP_009416507.1|3.25E-105PREDICTED: trihelix transcription factor GTL1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LJG8|ASIL2_ARATH3.00E-41Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|M0SWZ5|M0SWZ5_MUSAM2.00E-98Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P09160_001}
TAIRAT3G586301.00E-56sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000181379249392375-
Transcript Sequence

Network for GWHGAAEX006366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4161076.70E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.980
SRR2545915Juvenile tuber11.510
SRP108465SRR5643513five period of Gastrodia elata14.940
SRR5643514five period of Gastrodia elata10.930
SRR5643515five period of Gastrodia elata17.850
SRR5643524five period of Gastrodia elata11.090
SRR5643525five period of Gastrodia elata19.020
SRR5643528five period of Gastrodia elata16.150
SRR5643658five period of Gastrodia elata14.200
SRR5643659five period of Gastrodia elata22.160
SRR5643660five period of Gastrodia elata19.260
SRR5643661five period of Gastrodia elata21.310
SRR5643662five period of Gastrodia elata24.060
SRR5643663five period of Gastrodia elata20.990
SRR5643664five period of Gastrodia elata39.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.430
SRR6049655Rhizomagastrodiae_C368-T10_good_114.310
SRR6049656Rhizomagastrodiae_C368-T07_good_116.100
SRR6049657Rhizomagastrodiae_C368-T07_good_115.120
SRR6049658Rhizomagastrodiae_C368-T04_good_118.130
SRR6049659Rhizomagastrodiae_C368-T04_good_117.240
SRR6049660Rhizomagastrodiae_C368-T01_good_118.030
SRR6049661Rhizomagastrodiae_C368-T04_good_115.010
SRR6049662Rhizomagastrodiae_C368-T01_good_114.210
SRR6049663Rhizomagastrodiae_C368-T01_good_117.660
SRR6049664Rhizomagastrodiae_C368-T10_good_114.410
SRR6049665Rhizomagastrodiae_C368-T10_good_114.410
SRP279888GastroGastrodia elata tuber 19.29
JuvenJuvenile tuber16.88
Mother_GastroMother tuber of Gastrodia elata 29.66
Mother_JuvenMother tuber of Juvenile 25.38