Gene detail

Detail information of GWHGAAEX006373/evm.TU.scaffold_180.27

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672132788\|ref\|XP_008789985.1\|	0	PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Phoenix dactylifera]
Swissprot	tr\|P81898\|PNAA_PRUDU	1.00E-171	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A heavy chain
trEMBL	tr\|W1Q0Y2\|W1Q0Y2_AMBTC	3.00E-175	Uncharacterized protein {ECO:0000313\|EMBL:ERN13870.1}
TAIR	AT3G14920	3.00E-162	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000181	464891	466965	-

Transcript Sequence
>GWHTAAEX006373 AAGAGAGAGCATTTGAATTAGGTTAGCATAGAGACTAATGCTCGGAACATTTAGCATCTAAACCCTAAACCCCGTATAACCTTGACTCATTGTTAATGTCTCATAATAATTCTCTCCTCTTCTACGAAAAACGTACAGAGGCTGCAACTTCTGGAGATGCCCCTATAAAACCCGGAGAGCGCTTTCTCTGTCTCTCGCACATTCACAGAATGGCAAACCTTTTCATGATCATCTCCTCCATCCTTCTTCTCCGCTACTGCACTGCCTCCTCCGTCCTCCCCAACGTACTGAACACTCGATTCACATTCCCTTCCCCACCCCATTCATCCCCCTCCGACATCTTCGAAATCAAACGGCCGATTGTCGTCCCCGAAGCGGCGGCCTGCTCTGTCCTCGTCCTCCAGCAAGACTTCGCGAACTCGTACAGCAATCCTCTGGTCTCGGCGCCCTACACCCCGCCCTCTCGCTGCGAATACAACAGGATAATCCTAGAATGGTCCGCCTCCAGCTCTGGCATCCAATACGACCGCATTATCGGCATCTGGCTCTCCGGCGTCGAGCTCCTCCGCAGCAGCACTGCCGAGCCCAGCCCCACTGGCATCCGTTGGTCCGTCAGCAAAGAAGTAACTCGCTACGCCTCCCTCTTTTCTGAATCCCAAACCCTGACCGTCAGCCTCGGCAACATCGTCGACGAGGCCTTAACCGGCATCTACCGCGCCAACGTCTCCTTCCACTTCTATGCAGACCCGACCGCCTCAGCTTCAAACACCCCCGCCGATCTCGTCCTTCCCATCTCCAGAACAGCTCATTTGAGCGACGGCCTGTGGTTCCATATTCAGAGCTCGAAGGATTTGCAGGGCAGGAGCGTGGCCATCCCCGGAAATGCTCACCGGGCAGTTATTGAGCTCTATGTCTCATTCCATGGAAATGACGAGTTTTGGTATTCCAATGTTCCCAATTCTTTTATTTCCAAGAACAACCTCACTTCTGCTCGCGGAAATGGGGCTTTCAGAGAGGTGATTGCGATGCTGGACGGCAATGTGGTGGGCGCTGTTTGGCCGTTCCCCGTGATTTATTCTGGAAGTTTTAATCCTGATTTGTGGAGGCCGGCTGCGGGCATCGGCTCTTTTGATCTCCCTTCGTACGACCTAGAAATCACGCCGTTTCTGGGAGAACTTTTGGACGGCCAAGAACACTCCTTTCAATTCAGAGTTGAAGGCGCGAATGATTTCTGGTTAATCGATGCGAATCTGCATCTTTGGATTGATCAGAAGAGACAGTCGACGAGAGGAGGCTTGATTGACAGTCGAGCTCCTGCGTCTCCTCCATCTGTGATTTCGTTGTCTCATGGCCTTAACGGGCATTTCAGCACCTCCGCAACAAGAAAAATCTCATCGATTGGATGGGTCGAATCGTCCCATGGAAATATAACCACGAAGGTCTTTCAAAAGCTTATTTTTAAGAATAAGATGAAGCTTGCCGATGAAGGAAACAGACAAAGTGTGAAACAAATCATTAATAACGCTCATGGAAGTTCTGCGATAAAATCGGCTTCGTTGATTCGCTCTGAACGCATTACCCAGTCGTTTCCTCTTTCTTTGCTTACGAGGATTGAAGGCCAAATTGATCAAACTAGTTATACCTTAATCACAAATATTTCATCAGGATTCAATGAAAAAATAGTCGTAGAAGCGGAATCGAACAATTCACTTTCTGATTTGAGGAATTTGCAGTCCGGTCACAGCATCATACACGTGAAGAAAAATATGATTACCAGTGGCCAAGCTGCTGCTAAGCGTTCTTTCTCATATCATGGAACAGATGACTGCTACTTGAGAAATACTTCCATTCAAAACAACGAGATTACATCTTCTTATGCAGGAGATGTTTGCCCAACACATCACTCTGGTTCTTATGCAGTAGCTTGAGTCTTTATTGCGCGGCAAATAAAGCATTGAGAAATATTGTGCTGTGATGCTCTCTCTATCCTTTTTGCAATTTGAATGATACTTTACGGTGCTGGTTTTATTATTTTTTGTCTGTGAAGTCTCTGATCAAGCAGAAGATTAAATGGC

Network for GWHGAAEX006373

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12222.7	PNGaseA	94	500	6.70E-114

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.550
SRP064423	SRR2545915	Juvenile tuber	0.370
SRP108465	SRR5643513	five period of Gastrodia elata	47.360
	SRR5643514	five period of Gastrodia elata	47.420
	SRR5643515	five period of Gastrodia elata	25.230
	SRR5643524	five period of Gastrodia elata	43.170
	SRR5643525	five period of Gastrodia elata	0.470
	SRR5643528	five period of Gastrodia elata	0.910
	SRR5643658	five period of Gastrodia elata	0.490
	SRR5643659	five period of Gastrodia elata	1.270
	SRR5643660	five period of Gastrodia elata	0.940
	SRR5643661	five period of Gastrodia elata	0.930
	SRR5643662	five period of Gastrodia elata	1.010
	SRR5643663	five period of Gastrodia elata	0.980
	SRR5643664	five period of Gastrodia elata	0.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	111.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	252.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	112.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	43.430
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	95.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	109.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	48.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	73.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	146.670
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	133.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	378.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	378.420
SRP279888	Gastro	Gastrodia elata tuber	0.44
	Juven	Juvenile tuber	6.69
	Mother_Gastro	Mother tuber of Gastrodia elata	4.62
	Mother_Juven	Mother tuber of Juvenile	1.45