Detail information of GWHGAAEX006382/evm.TU.scaffold_180.37
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226225644|ref|YP_002759750.1| | 4.00E-15 | putative protein kinase [Gemmatimonas aurantiaca T-27] |
| nr | gi|695035286|ref|XP_009405076.1| | 5.51E-171 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103988248 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8RWZ5|SD25_ARATH | 7.00E-87 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (Precursor) |
| trEMBL | tr|K3XEF3|K3XEF3_SETIT | 2.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si000270m} |
| TAIR | AT4G32300 | 5.00E-79 | S-domain-2 5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000181 | 708052 | 709556 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006382
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 265 | 444 | 5.20E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_SD-2b |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.340 |
| SRR2545915 | Juvenile tuber | 11.650 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.060 |
| SRR5643514 | five period of Gastrodia elata | 1.100 | |
| SRR5643515 | five period of Gastrodia elata | 1.810 | |
| SRR5643524 | five period of Gastrodia elata | 1.360 | |
| SRR5643525 | five period of Gastrodia elata | 1.080 | |
| SRR5643528 | five period of Gastrodia elata | 0.710 | |
| SRR5643658 | five period of Gastrodia elata | 2.370 | |
| SRR5643659 | five period of Gastrodia elata | 0.820 | |
| SRR5643660 | five period of Gastrodia elata | 0.680 | |
| SRR5643661 | five period of Gastrodia elata | 0.800 | |
| SRR5643662 | five period of Gastrodia elata | 0.840 | |
| SRR5643663 | five period of Gastrodia elata | 0.640 | |
| SRR5643664 | five period of Gastrodia elata | 1.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.400 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.810 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.650 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.050 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.690 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.690 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.52 |
| Juven | Juvenile tuber | 1.21 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.25 | |
| Mother_Juven | Mother tuber of Juvenile | 1.82 |