Detail information of GWHGAAEX006385/evm.TU.scaffold_180.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|661880466|emb|CDP15997.1|8.97E-27unnamed protein product [Coffea canephora]
Swissprottr|Q39688|EP1G_DAUCA6.00E-06Epidermis-specific secreted glycoprotein EP1 (Precursor)
trEMBLtr|A0A068V600|A0A068V600_COFCA3.00E-27Coffea canephora
TAIRAT1G788501.00E-07D-mannose binding lectin protein with Apple-like carbohydrate-binding domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000181710721711940-
Transcript Sequence

Network for GWHGAAEX006385

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.400
SRR2545915Juvenile tuber10.120
SRP108465SRR5643513five period of Gastrodia elata0.690
SRR5643514five period of Gastrodia elata0.410
SRR5643515five period of Gastrodia elata0.770
SRR5643524five period of Gastrodia elata0.680
SRR5643525five period of Gastrodia elata0.140
SRR5643528five period of Gastrodia elata0.420
SRR5643658five period of Gastrodia elata1.680
SRR5643659five period of Gastrodia elata0.330
SRR5643660five period of Gastrodia elata0.240
SRR5643661five period of Gastrodia elata0.870
SRR5643662five period of Gastrodia elata0.370
SRR5643663five period of Gastrodia elata0.560
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.260
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.110
SRR6049657Rhizomagastrodiae_C368-T07_good_10.100
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.140
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.25
JuvenJuvenile tuber0.70
Mother_GastroMother tuber of Gastrodia elata 0.42
Mother_JuvenMother tuber of Juvenile 1.05