Detail information of GWHGAAEX006396/evm.TU.scaffold_180.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32147.00E-26Uncharacterized Zn ribbon-containing protein
nrgi|672184455|ref|XP_008812538.1|3.15E-56PREDICTED: transcription elongation factor 1 homolog [Phoenix dactylifera]
Swissprottr|Q8LHP0|ELOF1_ORYSJ5.00E-56Transcription elongation factor 1 homolog
trEMBLtr|W9R774|W9R774_9ROSA2.00E-56Uncharacterized protein {ECO:0000313|EMBL:EXB39509.1}
TAIRYKL160W7.00E-26Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018110335971040376+
Transcript Sequence

Network for GWHGAAEX006396

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05129.12Elf12786.10E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms124.450
SRR2545915Juvenile tuber109.580
SRP108465SRR5643513five period of Gastrodia elata183.410
SRR5643514five period of Gastrodia elata207.150
SRR5643515five period of Gastrodia elata178.090
SRR5643524five period of Gastrodia elata193.190
SRR5643525five period of Gastrodia elata272.210
SRR5643528five period of Gastrodia elata256.660
SRR5643658five period of Gastrodia elata240.750
SRR5643659five period of Gastrodia elata155.790
SRR5643660five period of Gastrodia elata159.810
SRR5643661five period of Gastrodia elata176.400
SRR5643662five period of Gastrodia elata162.110
SRR5643663five period of Gastrodia elata160.500
SRR5643664five period of Gastrodia elata150.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1123.920
SRR6049655Rhizomagastrodiae_C368-T10_good_1190.130
SRR6049656Rhizomagastrodiae_C368-T07_good_1137.330
SRR6049657Rhizomagastrodiae_C368-T07_good_1113.280
SRR6049658Rhizomagastrodiae_C368-T04_good_1123.560
SRR6049659Rhizomagastrodiae_C368-T04_good_1112.740
SRR6049660Rhizomagastrodiae_C368-T01_good_1108.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1109.220
SRR6049662Rhizomagastrodiae_C368-T01_good_1124.730
SRR6049663Rhizomagastrodiae_C368-T01_good_1123.610
SRR6049664Rhizomagastrodiae_C368-T10_good_1169.170
SRR6049665Rhizomagastrodiae_C368-T10_good_1169.170
SRP279888GastroGastrodia elata tuber 197.11
JuvenJuvenile tuber169.73
Mother_GastroMother tuber of Gastrodia elata 284.49
Mother_JuvenMother tuber of Juvenile 236.74