Detail information of GWHGAAEX006405/evm.TU.scaffold_180.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320103696|ref|YP_004179287.1|6.00E-24serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
KOGKOG06000Cdc2-related protein kinase
nrgi|743799734|ref|XP_010925563.1|0PREDICTED: probable serine/threonine-protein kinase At1g54610 [Elaeis guineensis]
Swissprottr|F4I114|Y1960_ARATH0Probable serine/threonine-protein kinase At1g09600
trEMBLtr|A0A061F6L1|A0A061F6L1_THECC0Kinase superfamily protein {ECO:0000313|EMBL:EOY13010.1}
TAIRAT1G530500Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018114784601511506-
Transcript Sequence

Network for GWHGAAEX006405

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1164009.50E-69
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CDK-CRK7-CDK9

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.980
SRR2545915Juvenile tuber12.890
SRP108465SRR5643513five period of Gastrodia elata22.070
SRR5643514five period of Gastrodia elata25.940
SRR5643515five period of Gastrodia elata18.470
SRR5643524five period of Gastrodia elata26.360
SRR5643525five period of Gastrodia elata36.110
SRR5643528five period of Gastrodia elata22.740
SRR5643658five period of Gastrodia elata16.410
SRR5643659five period of Gastrodia elata18.900
SRR5643660five period of Gastrodia elata27.580
SRR5643661five period of Gastrodia elata21.900
SRR5643662five period of Gastrodia elata15.260
SRR5643663five period of Gastrodia elata14.890
SRR5643664five period of Gastrodia elata13.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.030
SRR6049655Rhizomagastrodiae_C368-T10_good_137.190
SRR6049656Rhizomagastrodiae_C368-T07_good_132.610
SRR6049657Rhizomagastrodiae_C368-T07_good_123.530
SRR6049658Rhizomagastrodiae_C368-T04_good_131.370
SRR6049659Rhizomagastrodiae_C368-T04_good_135.800
SRR6049660Rhizomagastrodiae_C368-T01_good_122.650
SRR6049661Rhizomagastrodiae_C368-T04_good_124.330
SRR6049662Rhizomagastrodiae_C368-T01_good_130.540
SRR6049663Rhizomagastrodiae_C368-T01_good_130.850
SRR6049664Rhizomagastrodiae_C368-T10_good_148.070
SRR6049665Rhizomagastrodiae_C368-T10_good_148.070
SRP279888GastroGastrodia elata tuber 18.56
JuvenJuvenile tuber34.97
Mother_GastroMother tuber of Gastrodia elata 18.54
Mother_JuvenMother tuber of Juvenile 26.11